K11015

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K11015

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K11015

Determination of introduced cDNA(s)

  • J013001J09 - Rice Full-length cDNAs - Original: J013001J09

    full reading [+] show sequence

    Nucleotide sequence: J013001J09 - full reading 
    GGCTTCCCCT CCTCTTCCTC CGCTCCCCAA TCTGGTCTCG CCCTTCGCCG 
    CGCGAGAGGA GAGAGAGAGA GAGAGAGCTC GCTCGCGCGC GCGAAGAATC 
    GACGAGGAGG AGGAGGAGGA AGGGGAGAGG GGGAGAGGCG CCATGGGGAA 
    GAACCAGGCG TACAAGGCGA TGCAGCGGGC GCGGCTGGGC TCCTCGTCCG 
    GCGCCCCGGG CGCCACCGAC TCCCCCGAAG ACGGCATGAG TGGCATGCGG 
    CGCGGTTGGC CAGCCTGAAC AAGACGCACA CCGTCACGTG GGAGGAGTTC 
    AAGAAGAAGC AGAAGGTACA CAAGTCCATC GCTTTGCTCG GTTTACTACT 
    GTTAGCTTTG ATCAGCTGGT TTATATTCTC TAGTTCTCCT TTTGTGTGCG 
    CAAACCCGCG GACCATGGTA GTGCAAGATG TCCTCTTGTT GCTCCTACCA 
    TGTTGTAGTG TTGGTGATAC TGATTGTTCA TTTTCTGTGT GTTGATGCGC 
    TGTATGATGG TCTGATGCAG GATGGTCGTT AGATAATGAA AGATATGATT 
    AGTTGTTCTC TCCCAGATAA CACTCTTAAT GTGATGAGTA AATTTCATTG 
    TATCCTTGTA TGTATCTGCT AGTTGAATTT GGAACGCCGA TTTTACCTTT 
    CCTAGCACAT GTAGCAGCGA ATAAATTTCT GAATTGTATA ATATTGGAGG 
    ATTTATCAAC CTGAACCTCT GTAGCTCATT CAAGAAGCTT ATTCTTGCCC 
    CCCGTCAATG CATTAACAAA GTGCATAGAC TTTGTAGTTG TGGTTTACTG 
    TTACAAACTT GAGCTAACAT TTGGAGCAGA ATAGTTGGAG CACATGGTGT 
    TACATGATCA GTTTTGTACT CATAAACCAT CTCTAGGGAG CTTTCATATT 
    TCCGTCTTAT ACTTGATTTG GTTCCTCGGC TAATGATATC AAATTGCATC 
    TCTTTTATGT TTATTGGCCG TCAGGTGGTT ATGGATGGCG CTTGCACTAA 
    TTCCGAAAGT CCAACCTATA CCTTTCTGAC ATTGCTCAGG AATCAGGATT 
    ATTTTTTACA AATGAATTGT GGTTTTCTGC ATGAACCCCC ACAATGTTGC 
    AGCACATAAT CCTAAGCCTT CTTGTACTTA TGCAGAGATT GATTTGTGAC 
    TACAGCTGTT TATTATCAAT ACTTGTACAG TAGCTCATGC TGCTCTTTGG 
    CTCTTTGCCC TAATAGGAAG ACGAGTTAAA GAGGGGTGAA ATGGAAGCTG 
    ACAAAGATAA AATGATGAGA GAATATAGGG CTCAACTGGA TGCTGAAAGG 
    GCACAAAAGC TAGCTCTTGG AAGAAACCAC TCAAGGTCAA AGTCATCATC 
    TTCTAAGAAA GAGAAGAAGG ATAAAGATGC AAAGAAACGG AGTAAAAAGA 
    GGAGAAAGCA TAGAAGTTCA TCAGAGTCAA GTTCCAGTTC ATCGTCGGAA 
    TCATCAAGCA GTGATGATGA GGATAGGGAT TCGAGAAAGT CCAGGTCACG 
    GTCCAGATCG AAGAGGACAA AAAAGGATAA GAAGTACAGG TCAAGATCCA 
    AGCACAGGGG CAGTGATAGT GAGGAGGAAG GACCTGTGCG GCTCTCTAAA 
    TTCTTTGGGA ACCCAAAGAA ATAGATGAAT ACCGGGAGGC CTGCAGCCAG 
    AAGACCTCGT CGCATAATCT CTCTTGAGCT ATGAATTGAT GGTTGTAGAC 
    TGTATCATTA AGCTCTAATT ACTGTGTTAA GGTGGGAAAA AACCGATTAC 
    TGTATTACAT CTCAAGAATG TTAAATCAAT TTGACGGTGC GGCATTTGAA 
    TATGAATTCA TTGTAACATA GTAGTACGTG ACAAGGGAGA TATGCTGGCA 
    CTTAATAGC

    Gene models with high sequence identity

    1. AT3G59800.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G43795.2); ...
      E-value: 4e-14; Score: 45.10

     

    InterPro Scan Digest

    See the detailed result >

    AT3G59800.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G43795.2); Has 15361 Blast hits to 8061 proteins in 537 species: Archae - 2; Bacteria - 622; Metazoa - 7561; Fungi - 1246; Plants - 920; Viruses - 49; Other Eukaryotes - 4961 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR