K11027

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K11027

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K11027

Determination of introduced cDNA(s)

J023114E18 - Rice Full-length cDNAs - Original: J023114E18

full reading [+] show sequence

GACGCGTTGA TTCTGCTCGT TTAGCTAGCC CGCCTCTGAC GCTGCATTAT 
GGAGGGAGTA GGCTTGTAGC TAGCCCGCCT CTGCACGCTA TATTTCAAGG 
AATCAGAGAT CCATACAGAC AGAGACGTTC AGCCATCAGA CCTGCAGAGG 
CAATCCATCC ATGGCATCTA TCGTTCCTGT ACTCCTGCGC CTGCTGCTCC 
TGCTGCTCCC GCTTCCCCTG ATCCGAGACC ACCTCTGGCC GAGCCACCGC 
CGGCCAACGC CGCAGGACGA TGCGGGTGAG CTCCACCCGA TCTTCCTGGT 
GCCCGGGGCG AGCTGCAGCG ACCTGGAGGC GCGGCTCACC GAGGCGTACC 
GGCCGTCGAC GGCGCACTGC GGCGCGATGA AGGGGAAGGG ATGGTTTGGG 
CTGTGGGAGA ACAACACGGA GCTGCTGGTC CACGACTACG CGGACTGCTC 
ACTGGAGCAG ATGACCCTGG TCTACGACCC CGCCGCCAAC GAGTACCGGA 
ACCTGCCCGG CGTCGAGACC CGGGTGCCCA ACTTCGGCTC CGCATGGTCG 
TTCGGCTACA AGAACCCTGT TAACCGTCTA CAGAGAGCAC AATGCCTTGG 
AAAGCTCAGA GACTGGCTGG AAGAATTGGG ATACCGTGAT GGGGACACCA 
TGTTCGGAGC TCCCTATGAT TTTCGCTACG CCCCGCCGGT ACCCGGCCAA 
ACATCCGAGG TGTACTCTCG CTACTTCAGC GAGTTCATGG CGCTCGTCGA 
GGCAGCGACC AAGAAGAAGC AGAAGAAGGC CGTCATCCTG GGGCACAGCT 
ACGGAGGGAT GGTCGCGCTC GAGTTCGTCA GGAGCACCCC GCGGGCGTGG 
CGGGACGCGC ACATCGAGCG CCTCGTCCTG GTCGCGCCTA CGCTCCAAGA 
TGGGTTCGTA GGCTCGGTGA TGAAGTTCAT CACGGGGACG GGCATAATTT 
TCGTCCCGAC AGCCACGTCC ACGAGGCCCA TGTGGAGGAG CTTCGAGTCC 
GCCATGGCGA GCTTCCCGTC CCCGGCCGTG TTCGGCCGCG AGCCGCTCGT 
GGTCACCAAG AGGAGGGACT ACTCCGCGTG CGACATGGAG GATCTCCTAG 
CCGCCCTCGG CTTCGGCGAG GGCGTCGAGC CTTTCCGGCG ACGGGCCGTC 
CCCAGGATGT ACAGCCTCGA GGCGCCGATG GTGCCCATGA CGTGCATCAA 
CGCGGTGGGC AACAAGACGC CGCTGCAACT GGTGTTGTGG GACGACGACG 
ACGATGACTT ATTAGACGCG TCACCGGAGG TGGCAGCGTA TGGTGACGGA 
GACGGCGAGA TCAACCTGAT CAGCATGTTG GCGTTTGACA CGGAGATGGG 
TCGGCAGCCA GGACAGGAGA AGCGATTCAA ATCCGTCAAG ATAGCTAATG 
CTAACCATTC CACGATTGCC ATTTATGATT TTGCACTAAA GAGGATCATT 
CAAGAAATTA TTGAGGTGAA TCAGGTACGT TAGTAGACAC TCCGTACGTT 
GGGTTTCACG TATATATGTT GGGTTTCACT GTGCGCGGTA ATCATATATA 
TCACGTGTGG AATTCTGTGT AATAAATGAA TCCCATGCAG CTTTGTGTAT 
ACCGATGGGT TGGTTGGTAA ATAAAAACCA AAAATTACTG CTCCC

Gene models with high sequence identity

AT1G27480.1 [+] show detail - alpha/beta-Hydrolases superfamily protein
E-value: 4e-53; Score: 206.00

InterPro Scan Digest

Program	Description	E-value
superfamily	alpha/beta-Hydrolases	1.2e-11
Coil	coiled-coil	0
HMMPfam	Lecithin:cholesterol acyltransferase	1.4e-26
HMMPanther	PHOSPHATIDYLCHOLINE-STEROL ACYLTRANSFERASE-RE	1e-36
HMMPanther	Lecithin:cholesterol acyltransferase	1e-36

See the detailed result >

AT1G27480.1

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Computational Description: alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); Has 1076 Blast hits to 1070 proteins in 248 species: Archae - 0; Bacteria - 41; Metazoa - 667; Fungi - 0; Plants - 226; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink).
Link: InterPro Scan - TAIR