K11125

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K11125

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)
  • low brightness (PATO:0000327)
    (Seed::Color::dark)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K11125

Determination of introduced cDNA(s)

  • J013101D18 - Rice Full-length cDNAs - Original: J013101D18

    full reading [+] show sequence

    Nucleotide sequence: J013101D18 - full reading
    GACTGCGCAC ACACACACAC AAACACAAAG ATGGAGAGGG TAGCAACACT 
    GGTCTCTTGT ATAGCGGCCG CGACCGCTAT GCTGCTTGCG GTGGCAGCAG
    CCGCAGCGGG GAGTGGCGGC GGCGGCTGCA CGCGGAGCTG CGGCAACATC
    AGCGTGCCGT ACCCGTTCGG CGTGGAGGCC GACTGCTACT ACCCCGGCTT
    CAACCTCACC TGCAACCACT CGTACCACCC GCCCACGCTC TTCCTCGTCG
    ACGGCGCCGG CACGTCCCAC CAGGTGCTCG ACATCTCCAT CTCCAACTCC
    ACGGTGCGCA TCAACAGCAG CCTCATCGCG TTCACCAAGT CTGCCGACAA
    GCAAGCCGTC ATCAACACAA CGTGGGAGGT GAGAGGCCCG TACTACCTGT
    TGGATGATCC TTCCAATATG GTCGTCTTGG TAGGCTGCCA AGCGCGGTTC
    GACGTCCGGG GAGGAAGCAA CAACACCCTG ATCAGCTCCT GCACCGTCGT
    GTGCCCATCA CCTGATCCTA GCACCACCTA CATCGGAGCT GGCGACGGCT
    CCTGCTCGGG CGTCGGCTGC TGCCAGGCGA ACATCGTCCT ACGCTACTCT
    CGCTACACCG TCCAGATCCA CGACCTGCAA GAGCAGGATG CGCCGTCGTC
    CAGTCCTACT TTTAATGATG GCTCGGCGTA CATAGTAGAT CAGCCATTCA
    ATTACACCGG CCTTATGATT TTCGAAAAAA ATTTCCCTCA AGCGCTCCCA
    GCCATGCTAG ACTGGTTCAT AGTAGGTGAT AATTCGACAT GCCCGATGTC
    GACGAATGAG TCTGCGCCTG CGCCTGCGTC CGCTGCCGAG TGTCGCAGCG
    TGCACAGCTT TTACGAAGGT TACTACGGTG ACGTTTCTGA CGATGTGGTG
    GTGGGGTATC GGTGCCGCTG CTCTCCGGGT TACCAAGGAA ATCCTTACGT
    AAAAGATGGA TGCTACGGTA TGTGTTTACC CTCTCTGTTT TTTTTTACGG
    AATTGCCAGA AAACTTGCGC AAGTTTTTTT TCATCCCAGC TTCCCAATTT
    TTAGCCGTAC GATGCTACGT TAAAATTTGT GTTAAACCAG TTATATATTA
    TAATTACAGT ATAGTTACAA TTAGTTACAA TAAGATGCAA TAACTGTAAC
    TATATTATAA CCTCTATATA ATTTAGGTAT AAAAGGTTGC CTATATTTTT
    TTAATACTTA TATACAAGTT ATATTATAGC TATAATATAA TTATGAGGAA
    TTACATCATA ACTATGTTAC ATTATATTTA AAAGTTTCCA CTTAAAAAAT
    TTGCAACAGA TTTTTTAGAT AATTATCCTC TATCTCATAA TATATGACAT
    TACTTAGTTC ATTTTAAACT ATCCAACGTC ACAACAAAAT AAATATATTT
    ATAATATTTT TAGATGCATC TATACATGAT GTGACAAATT TCCAACTACA
    AAGGACAACA TTCAAATTTC TCTAAATCTC TACTACTTAA AAAAATTATT
    TTTTTAAAGA AGTTTCCGTC TGTCTACAAC AAAAAAAAGA GCG

    Gene models with high sequence identity

    1. AT1G21230.1 [+] show detail - wall associated kinase 5
      E-value: 2e-16; Score: 84.70

     

    InterPro Scan Digest

    See the detailed result >

    AT1G21230.1

    Model type
    Protein coding
    Short Description
    wall associated kinase 5
    Curator Summary
    encodes a wall-associated kinase
    Computational Description
    wall associated kinase 5 (WAK5); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: cell wall-associated kinase (TAIR:AT1G21250.1); Has 137298 Blast hits to 123121 proteins in 4733 species: Archae - 125; Bacteria - 14072; Metazoa - 61552; Fungi - 9626; Plants - 33595; Viruses - 427; Other Eukaryotes - 17901 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR