K11126

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K11126

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K11126

Determination of introduced cDNA(s)

  • J023092G05 - Rice Full-length cDNAs - Original: J023092G05

    full reading [+] show sequence

    Nucleotide sequence: J023092G05 - full reading 
    GCAGAGAGCT CGCAACCACA GGCTAATTTA ATTAGCACCA GAAATATGGC 
    TTCTTCCAAG ATGACGCTGC TCCCCGTCCT CCTCCTCCTC GCCGCGGCCT 
    CGCCGGCGGC GCTGGGCGCC TTCGACGTGA ACCAGATGCT CGCCGACAAG 
    TCCCAGTACG GGTCGTTCCT GAAGTTGCTG ACGCAGACGA AGGTCGCGGA 
    GGAGACGAAC CGGCTCAAGT CGGCGTCGCT GCTGGTCCTC CAAGACAAGG 
    CCATGAAGCC GATCACGTCG CTCCCCGCCG ACAAGCAGCG GATGGCCATG 
    GCCAACCACG TCCTCCTCAA GTACTTCGAC CCCATCCAGC TGGGCGAGAT 
    GAAGGACCGC ACCGCCATGC TCCCCACGCT GCTGTCCAAC ACCGACAAGA 
    AGCTCGGCGT CGTCAACTAC ACCAAGGCCA GCGACGGGCA GATGTACCTG 
    GGCGCCCCCG GCGCGGCCTG CGTCGCCAAG CTCGTCAAGG TCGTCGCCGC 
    GCGCCCCTAC GCCATCTCCA TCATGGAGGT CAGCGAGGCC ATCCTGCCGC 
    CCGCGCTCGG TGGCAGCGGC GGCCCCGGCC GGCGCGCCAA GGGCGGCAAG 
    GGAAAGGTCA AGCCGAAGTC CAGCGACGCC GACGAAGCCG CGGCCAAGCC 
    CGCCACGGAG CCAAAGGCAA CCGATGTCCC TAAGTAAGCC GGTGGCAAGG 
    TCGACGCCGA TCGACGCGCT CGTCCGTCCA CGTACAAGTT TGGAATTGGA 
    TAGCGCAATA ACCACGCACG GCTAGGCGTA ATGTGTGACG ACACGTACGG 
    CGCATTACCA GTCTAGTATA CCATCACCTT TGACCTGTAC TGCTAATTTT 
    CAGTTTAATT TGTATTCGAT CAAGTACGTG AAATTGGGTC GAGTTCGATC 
    GATCGGTTGT TTCATACGAA CCGAGTTTTG TACTGCTACT AATTAATGTA 
    ATGGCTTATG GCTAATGCAA ATATTTGCAT GTATACGGCT GATCGATGTG 
    CATATACTGC ACATTATGTT CC

    Gene models with high sequence identity

    1. AT3G60900.1 [+] show detail - FASCICLIN-like arabinogalactan-protein 10
      E-value: 5e-13; Score: 72.40

     

    InterPro Scan Digest

    See the detailed result >

    AT3G60900.1

    Model type
    Protein coding
    Short Description
    FASCICLIN-like arabinogalactan-protein 10
    Computational Description
    FASCICLIN-like arabinogalactan-protein 10 (FLA10); LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 8 (TAIR:AT2G45470.1); Has 12874 Blast hits to 6768 proteins in 802 species: Archae - 107; Bacteria - 3922; Metazoa - 1175; Fungi - 784; Plants - 2143; Viruses - 697; Other Eukaryotes - 4046 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR