K11134

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K11134

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • low brightness (PATO:0000327)
    (Seed::Color::dark)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K11134

Determination of introduced cDNA(s)

  • J033131B10 - Rice Full-length cDNAs - Original: J033131B10

    full reading [+] show sequence

    Nucleotide sequence: J033131B10 - full reading 
    GGCGTTGTCC CTTCTCCCTT CACTCCGCTA GGGTTTTACC CCGCGATGGC 
    CGCCGCCGCC GCCGCCGCCG CGCGGAGGCT CCTCTCCCGC CGCGCGCCGA 
    CGGAGATGGC CCCGCTGTTC CCCGGGTGCG ACTACGAGCA CTGGCTCATC 
    GTGATGGACA AGCCAGGCGG GGAGGGCGCC ACCAAGCAGC AGATGATTGA 
    CTGCTACATC CAGACCCTCG CCAAGGTCCT CGGAAGTGAG GAGGAGGCGA 
    AGAAGAAGAT CTACAACGTC TCCTGCGAGA GATACTTTGG TTTCGGGTGC 
    GAGATCGATG AGGAGACGTC CAACAAGCTG GAAGGGCTTC CTGGTGTTCT 
    GTTTGTCCTC CCTGATTCCT ATGTCGACCC TGAGTACAAG GACTATGGAG 
    CTGAGCTCTT CGTCAATGGA GAGATTGTTC AGAGGTCCCC GGAGAGGCAG 
    AGGCGGGTAG AACCTGTCCC ACAAAGAGCA TCAGATAGGC CTAGGTACAA 
    TGACAGGACC CGATACGCCC GGAGGAGGGA GAACCAACGG TGATCTGATT 
    ATCAGAAGCC AAATAACAAA GCCGCCTGGG TGGCTTGAGG CCTTACTAGC 
    ATATGCTGAA TGGAACAATC TAAAAATTGC TTTAATAGTT TTGTCGCTGG 
    TATTGCTATT TTTCATGCTG GTGATTCTCA CATCTTTGGA TGTATCGCAT 
    TCTGTAATTA CTGGAAAACT TGAAAGTACC TGGCTTGGAA TGCATTGCTG 
    CTGCTGAACT CTTCGGCC

    Gene models with high sequence identity

    1. AT2G33430.1 [+] show detail - differentiation and greening-like 1
      E-value: 1e-69; Score: 259.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G33430.1

    Model type
    Protein coding
    Short Description
    differentiation and greening-like 1
    Computational Description
    differentiation and greening-like 1 (DAL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: plastid organization, endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA); LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT1G32580.1); Has 251 Blast hits to 228 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 251; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR