K11210

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K11210

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1 rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • increased width (PATO:0000600)
    (Rosette leaf::Shape::wide)
  • present in fewer numbers in organism (PATO:0001997)
    (Rosette leaf::Number::few)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K11210

Determination of introduced cDNA(s)

  • J023048L05 - Rice Full-length cDNAs - Original: J023048L05

    full reading [+] show sequence

    Nucleotide sequence: J023048L05 - full reading 
    GATCTACCCC ACTCCCCCCT CTCTCTCTCT AACACCACCA CCACCTTTCC 
    TCTTCTCTCT CCTCTCCACT CATCTCATCT CACTAAGCTC AAATTAAGCA 
    AAGGATTACA AGCAAAACCA AACCAAACCA AAGCAAAGAC TAGTGTAGAG 
    TAGAAGAGAA GAGTCCACCA AGAAACCAAG AAGCTAGAAG CATCATGGGG 
    AAGGATTGCG GCAAGCACGG CGACGACGAC TTCCGGCAGG GATGCCGGCG 
    ATTCATCACC GTCCTCGTCG TCCTCGCCAT CCTCGTCGGC ATCATCGCCC 
    TCATCGTCTA CCTCGTCCTC CGCCCCACCC ACCCTCGCTT CTACCTCCAG 
    GACGCCACCC TCCGCCAGCT CGACCTCTCC AACTCCTCCT CCACCGCCGG 
    CGGCGTCCTC TCCACCACCA TCCAGGTCAC CGTCGCCTCC CGCAACCCCA 
    ACGACCGCGT CGGCGTATAC TACGACCGCC TCGACGTCTA CGCCTCCTAC 
    AAGTACCAGC AGATCACCGT CGCCGCCTCG CTCCCGCCGG TGTACCAGGG 
    CCACGGCGAC GTCGACGTCT GGTCGCCGGT GCTCGCCGGC CCCAGCGTCC 
    CCTTCGCGCC CTACCTCGCC GACGCCATCT CGCAGGATTG CCAGGCGGGC 
    TACCTCATCC TCCAGGTCAA GATCGACGGC CGCGTCCGGT GGAAGGTCGG 
    CAGCTGGATC TCCGGCCACT ACCACCTCTT CGTCACCTGC CCGGCCTTCC 
    TCGTCACCGC CGGCGGCAAT GGCTCCCCCG GCGCCAGCGG CTTCAGGTTC 
    CAGACTACCA CCTACTGCCA CGTCGAGGTC TAGCTAAGCT AGTTATGTTA 
    TGATCTACTA CTGTGCCCAC CGCCGCCGCC GGAATCTGCT ATCTCCGGCT 
    AGTCGCCGGC GAGGTAGGTT TGATTTCTTG GAGGTGGTGG TGTTCTTGTG 
    CGTCCATAGT GAAAAAGAGA TGATGGTGGT AATAATGAAT TATTATGTGG 
    GTTACAAAAT GTAAAGGAGG TGGAGAGGCA ATTTAAGTAG GATTAATGGT 
    ATGGTT

    Gene models with high sequence identity

    1. AT3G44220.1 [+] show detail - Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
      E-value: 1e-45; Score: 180.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G44220.1

    Model type
    Protein coding
    Short Description
    Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
    Computational Description
    Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT5G22200.1); Has 838 Blast hits to 838 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 838; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR