K11220

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K11220

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K11220

Determination of introduced cDNA(s)

  • J033064F20 - Rice Full-length cDNAs - Original: J033064F20

    full reading [+] show sequence

    Nucleotide sequence: J033064F20 - full reading 
    GGCGTCGCGG TTTCGGTCTG GTCCCCCCCC GGAGCCACGC CACGCCATCG 
    TCGTCTTCCT CCTCCACCTC CTCCTCGTCG TCGTCGTCGT CTTCTTCTTC 
    TTCTCCCCCT GCAACGCAAT CCCATCTCAT CGACCTGCTT GCCTGCATAG 
    TGCGCGCCAA CCCCAACCCC TTCCCCTCTC CAAATCTCCT ACTGCCCCGG 
    CCCCGTGCTT CTTCGACCTG GGCACCCGCA CTGGTGCGGG ATTGGACTCA 
    CAGATTCTAG GGTTTCGCCC CTCGCGGCGA TTCCACCACC CAAGGTTTGC 
    GTTCCTTCTG TTGGTGCATA CACGACTCCA CCTATCACCG TTATGTTCTC 
    GCTGCGCAAT GCATAGAAGC TGCACTCACG AGGCTCCATC TCCTATGCTT 
    GTACCAGTAT ACTAAACAAT GGCCAAACTT CCAATAGTTG GTCGCAGTGC 
    ACCTCGCAAA CCCAACGAAA GCATGAGGCT TCTTGTAGTA ACAGTTATTG 
    GGGTGATGTT AGGTTTCTTT ATTGGAATTT CGTTCCCAGC AGTTAGCATA 
    ACAAAGCTTC ACTTCCCATC TAGTATTGTT TCGTACATAG AAGACAAGAA 
    CTCAGCATTG ACAGCTCAAG CGATACTAAA TCATGCTTGG ACAGCTGCTA 
    GGAATGCAAA GGGAAATGAT ACTGAATCAA GCTCAGACAC TGCCATGAAG 
    ATTTATGTAC CAACAAACCC CAGAGGAGCA GAGAGCCTGG CACCTGGTAT 
    TGTTGTACCA GAGTCCGATT TTCATCCACG CAGGTTATGG GGAAACCCAG 
    ATGAGGATCT ACCCTTCAAA CCGAAGTACC TTGTTACTTT CACTGTCGGA 
    ATTTCGCAGA AAGAGAACAT AAATAGGGCA GTCAAGAAGT TTTCTGATAA 
    TTTTGCTATC CTGTTATTTC ACTATGATGG TCGGGTGAGT GAATGGGATG 
    AATTTGAGTG GTCAAAGCGA GCTATACATG TTAGTGTACG GAGGCAAGCG 
    AAATGGTGGT ATGCCAAAAG ATTCTTACAC CCTGATATCG TGGCATCTTA 
    TGAGTACATA TTTATCTGGG ACGAGGATCT TGGAGTTGAG CATTTTAACG 
    CAGAGGAGTA CATTAAACTT GTCAAGAAAT ATCAGCTAGA AATCTCACAA 
    CCTGGTTTAG AGCCAGATCG GGGATTGACA TGGCAGATGA CCAAAAGAAG 
    AGGGGATCAC CAGGTTCACA AGGAGACAGA GGAGAGACCA GGCTGGTGCA 
    CTGACCCTCA TCTTCCACCT TGTGCTGCCT TTGTTGAAAT AATGGCCCCG 
    GTGTTCTCCA GAGATGCATG GAGATGTGTA TGGCATATGA TTCAGAATGA 
    CTTGGTTCAT GGATGGGGTC TTGATTTCGC TCTCAGAAGA TGTGTAGATC 
    CTGCACATGA GAAAATCGGT GTCGTTGATT CCCAATGGAT TGTACATCAA 
    GTGGTTCCTT CTCTTGGGAA CCAGGGGCAG TCAGAGCACG GGAGGGCACC 
    GTGGGAAGGG GTAAGGGAAC GTTGTCGGAA AGAATGGGGA ATTTTCCAGA 
    CGAGAATTGC GGAGGCAGAG AAGTCATATT ACGAGATGAT GGGCGTCCCC 
    CCACCAAACG TAACATTTGT CCACTAGGCT ACTATACATT ACCTGCTGTT 
    AATCCGCTCA CCTATTTTTT AGCCCCAATA CAATAGTAGC ACTTGTGTAG 
    AGAGCTAAGC TAGATATGAT GATGGTGATA TTCATGATAC GTGTAGAGCA 
    TACGAAACGT CATATCTATC TATTAATTCC ATTTTTTCTG TTTGATCTCG

    Gene models with high sequence identity

    1. AT1G67850.2 [+] show detail - Protein of unknown function (DUF707)
      E-value: 3e-164; Score: 575.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G67850.2

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF707)
    Computational Description
    Protein of unknown function (DUF707); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G13000.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR