K11339

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased size (PATO:0000586) (Seed::Shape::large) increased width (PATO:0000600) (Seed::Shape::wide)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K11339

Determination of introduced cDNA(s)

J013088D19 - Rice Full-length cDNAs - Original: J013088D19

full reading [+] show sequence

GATTAATTAT TGGAGAGTGC GGTCTCCTCT CCTCCCTCCC TGCTCGCGCT 
CTCAGTCTCC CCCATCCCCA ATCACCTTAC TAGCTTAGTA GCTTTGTGAA 
TCAATCAAGG CCAGGGTTTG ATCAGATCAT CCTTCCCTCC CATTTGCCCA 
TGCCTTGGCT TTGATCCGAC CAGGCATGGA GGGCGGTGGC ACGAGGACGC 
GCCGTCGCGC CGCCACCGCG AGCCCTGGAC GCAACAAGGT CTGGGTCGAG 
CCACCGGGCA AGACTCATCA CCTGCGCTCG CCGCCCCCGC CCCCTTCCCC 
GTCCTCCTCA AAGAGGGTGG CCGTCGTCTA CTACCTCTGC AGCAATCGCC 
ATCTCGAACA CCCCCACTTC ATCGAGGTGC CACTCGCCTC ACCGGACGGC 
CTCTACCTGC GAGATGTGAT TAACCGCCTC AACGTGCTGC GAGGGAAGGG 
CATGGCGGCA ATGTACTCAT GGTCGTGCAA GAGCAGGAGC TACAAGAATG 
GCTTCGTGTG GCACGACCTA TCCGAGGACG ATCTCGTCCT GCCCGCGCAA 
GGGAACGAGT ACATCCTCAA GGGCTCCGAG CTCCTCGACC GATCACCGCC 
AGATCGACAG CAGAATGGCG TTGGCGAGCC CAAGGTTGAG ACCCTCAAGC 
ACCCTCCAGA AGAGTCCCCT CATTCGCGAG GATCGCAAGA AGGGTGCTCC 
TCCTCATCAT CTCCATCTGC TGTTACAAAA GAGGCCTCCC CACCACCCCC 
TACACCACAG CCACAGCAGC AGGCACAATC GGCCACGTTG CTGCCTTCAT 
CGTCAGCTTC TACTAACCGT GAGGATGACC AATGCCGGAC TCCGCGCTCT 
GGCTCATCTG GAAACATGTC CCCTGAACCG GCAGGAAGAG TTGCTCCTCC 
ATTATCAGAG GCAAGCTCTC CAGGACCTTT AGAGTACAGA GTTTGCAAGC 
CCATCGGAGC CCAGGACGCA TCCACACAGA CCGACGACAG TGAGAGGGAT 
GCTCCTGAGA GGAATTCTCG TATGGCAGGA GTATGTACAG AGAATAGTAC 
ATCAGATTCT GAGATTCAGG AATGTCATCC AAGGAGCACA CAACCATCTC 
CAAAGGGTCC TGGAGTTGTT CGAGAATCAC CACCGGTGTG CTCCTCTGAC 
GCTTCTCCAG GTGGTAGAGT TGAGACCTTG GAGTCCCTGA TAAGGGCCGA 
AGCCAGTAGG AGGAGTAGCT TTAGGGCGCT AGAGGAGGAA CATCTCTTTG 
CCCCAATGGG TGTAAAGTTC AAGCCTGCCA ATTTGCTCAT GCAGCTGATC 
ACTTGTGGCT CTATTTCTGT TAAGGATCAC CGGAGCTTTG GGCTCATCCC 
AACATACAGG CCTCGGTTTA CACAAGTTGA GTTTCCTTCT CCAATGTTCT 
CTACTCCTTT GGCATTGCGA CACCTCGACA ACATTCCTTG TAATGCTAGA 
ACAATTGGAA TGAGAATTCC AGAATCAGAA TATTTCAGTG GGAGCTTGGT 
CGAGACAAAG AAGCAGGATG AGTCAGGGAA AGGAGGAACA CCAACACTTA 
AACGCTCATC ATCTTGCAGT GAGGACAGAG TCTGTAGAGT ATCGGATTCC 
AACAGGGACA TGGAAAGTAT GGCTGAATCA GGCAGCTTCA GATGTCTGCC 
ACAGACAATC AAAATGATAT CATGTAAGCA ATCTAGAAGT GGAACAATAT 
TGTCTCCCAA CTCGGATGTG AGGAACAGCT GTAGTCGACA AGAGTGTAGT 
ACTAGATCCT CACCACTTGG TTCATCAAAA AGTGCAAGCA ATAGGATGAC 
TGATTTATCA CTTGGTAAAC TATCTTCTTC AAGGGTGGAA TCATTCCATG 
AGGAAAAGGA GAAGGTGATC AAGATAGAAG AAAGCTTGCT TCTGGAGCTC 
GGGTTATAAT CCAATCTTCA CCCTTGTGTG AAGTGAGTGA TGACAGCACT 
GAATCACTGT AAGGGGCTGT GATTTTGTTT TCCTTTTGTT TTTCTGTGAG 
CTGGCTCATT GTAATTTGGT GTGTGTCTCA ATAGTTCTGG GAGTAGCTTC 
AAAGTGCAAT TTTATTCATT TTATGACATG TGTGATATTC AGCAATCAAT 
TTATTACACC TTCACGAAGA ATTTATTGCC TC

Gene models with high sequence identity

AT2G28150.1 [+] show detail - Domain of unknown function (DUF966)
E-value: 3e-75; Score: 280.00

InterPro Scan Digest

Program	Description	E-value
HMMPIR	Uncharacterised conserved protein UCP031043	6.1e-252
HMMPfam	Protein of unknown function DUF966	1.2e-95

See the detailed result >

AT2G28150.1

Model type: Protein coding
Short Description: Domain of unknown function (DUF966)
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369), Uncharacterised conserved protein UCP031043 (InterPro:IPR021182); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT5G59790.1); Has 2510 Blast hits to 686 proteins in 184 species: Archae - 0; Bacteria - 433; Metazoa - 315; Fungi - 216; Plants - 186; Viruses - 4; Other Eukaryotes - 1356 (source: NCBI BLink).
Link: InterPro Scan - TAIR