K11431

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	low brightness (PATO:0000327) (Seed::Color::dark)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K11431

Determination of introduced cDNA(s)

J013164O07 - Rice Full-length cDNAs - Original: J013164O07

full reading [+] show sequence

GAGCGTAGCC ATGAGCCCAT GACACCGAGC AGAGAGCGAT CACCATGGCG 
GCGTTCATGG CGAGCGGCAG GTCGACGGTG GCTCCTTCGA CCACCCGCAG 
CTGCCGGCCG GCGGCGGGAT TCGTCACCCC GCGCAGCCTC TTCAGCTGGG 
GCGGCAGAAG CGCGCCGCCG CCGGAGTTCC AGTACCACGA CGTCGCGCCG 
CCGTTCCCCA TGTCCCTCGT CGCCAACACC CACCTCAGAG GTCGCGAGCT 
GAAATGCTGC TACAAGGCCA CCGTGGACGG CTTCAGCGCG ACGGACTTCC 
ATCGCCGGTG CGACTTCAAG GGCCCCTGCG TAGTCGTCGG CCGCACCGGC 
GGCGGGGTCA GGTTCGGCGG GTTCAGCCCG GAGGGGTACC GGAGCACAGA 
CGACTACTAC GACACGCTCG ACGCCTTCCT CTTCTATTGG CCGGAGACGG 
ACACGGACGC AGCGGCGAAG GAGGCGGCGG TGGTGGTGCT GCCGAAGGTG 
GGCGGGAGCG GGGCGGCGCT GTTCGACTAC GCGCGGGGCG GGCCGCAGTT 
CTGTCGAAAC ATGAATTCGG CAATAATAAA AGGAGGTAGC GCACGAGACC 
TAAAAGTGGA TGGATGCAGA GACAAAGGAT TTAGACAGGT TCAGGCCCTC 
TCGATGAGAG GTAATACCCT ACTCCTGTTT GGGGATTTGA ATCCGCCGGT 
GTAGTATAGA TCTGACGATC AGGTTGTCTC ATGCCCCCTA GAGGGCCTCC 
TGCCCACCTT ATATAGGGTG GGGGGCAGGA TTACAAGATA GAAACTTTAA 
CCAATACGGT ATCGGTTTCC TAAATCAGGA CTTTAGGCCG TTCCGTAATA 
TACAAGGAAA CGTAACACCC AAGTCATGAT CTGTTACATA TTACATAGAG 
ATAAGTTATC CCCTATAACT AGTCGGATAA CCATGCCGTA TGGGTATGGG 
GTACCCATAA TATCCACAGT AGCCCCTGAG ACCTTCGCAG TCGAAAAGAT 
AATCTTCTCT CGAACCAGAT TACTCCAAAG CCGAGTGCTT CAATCATCTT 
TGTCATGGTC TCCCGAGTAC TTTTACCAAA TCTGAAGACT GTGGAGGGCT 
GAAAAATAAA GTCAGGTGCA CCGACTAGAT GCACCTAATA GGTGTAGCCC 
CCGACAATGT GGTTAATTGA ACAAACCAAG CATATAGTCA AGGAATAAAT 
AATCCAACCA ACCGAGTGGT TTTGATAATC GTAATCAACC AAGTGACTTG 
ATATCAATAT ATAGCATATG CGGTGTGAAT CCTCCAAATA ACATGATCCG 
AGTGATATAC CAACTGCTTT GTAAAATATG ATGAGTGATA TAGCAAAATA 
GCTATAAAGA AGCTTGTATA TTGTGAATAA AGAAATTTCC AAAGTATTGG 
GCATACGCCA TGCGCACACT GCTTTAACAG ATGTGTTTAA GTCCCTAGAA 
GACACATGGT TTCACCACAC CTGGAAATAT ATGGCATATG TGGTGTAAAA 
TCCGAGTAAA TAAACTCATA AAGGATTTAC CAACCGCCTA GAAAAAGACC 
ACAATATATA ATCAGCCTAA GCCATAATAT TGGTCAATAA AAATGCACAC 
TTACGTGGCG AAAAGCAATG ATATTGTATC CAATCAATTG CTTAAAAACT 
CAAACAGCAC CTTGAATTAT ATATAAAAAA GTCAGCGGGA CAGCTATATA 
AAGCTTTACT GTTTGACACC TTTTAAGATG CATTGTATCA ACTCCTAAAA 
AGTTAAGTAA CTGCGGTATA AAAGGATTTT AAGGTATTGG GCACTTGATC 
ACGCGCACTT TGGCCTAAGC AAAAAGTGCC TAAGTCCCTA AAAGAACGTG 
ACAGGCCACA CCTGAAAATA TGGGCTGCAG ACATATTAGG CCTAGGCCAA 
AACATATGCC TTCGACACCC TTTAAAGGAT GACGCATATA ACATGCTCCC 
GAGTAATAAA TCTTCCGGGT AATATAGACC AAGCGTAGCT CATATGAATA 
GCTTCTGATC TGAGTGGTTA TCCCTTATGG GATACTCCAA AATAGATGTA 
ACAATTGAAT CCCGACTGGC GCAAGTATTC AGTTGATAAC CCTTACGGGG 
AATAATAAAT AGTCCAGTCT TTGAGC

Gene models with high sequence identity

AT1G32520.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
E-value: 3e-35; Score: 147.00

InterPro Scan Digest

See the detailed result >

AT1G32520.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 143 Blast hits to 142 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Link: InterPro Scan - TAIR