K12713

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K12713

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
rosette leaf (PO:0000014)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)

Invisible phenotypes

Original: K12713

Determination of introduced cDNA(s)

  • J013001B11 - Rice Full-length cDNAs - Original: J013001B11

    full reading [+] show sequence

    Nucleotide sequence: J013001B11 - full reading 
    GACCACCATC CTCAACCTCA ATCCCCATCC ATTCCATTCC ATCCTGCACG 
    AGTTCTCCAC TGGAGTGGAG ATCCGTACTA TACTTTTTTT TATTATTACC 
    ACCTGCCCGC AAAACCAAAT CCCCGCACCT TCCTCTTTCC CCTTCTTTCT 
    CCTCCCAAAA CCGCTCTCTT TCTTCTCCCA ATTGCCCACC TACCGGAAGA 
    GAGGAAGAGA GAGAGAGAGA GATGGGTTCT TGCGGATTGA GGAGGGTCAG 
    ATGATGCCAT TACCAATTTA ACATCTTCTG CATCTTTTTT TTGCCTTTCT 
    TGGCATATTC TTCTCTTCTG GATGTGTAGA TCCTTCTTTC CCCAGTCCTG 
    CTTAGCTTTC AAGCAGACCA ACAGGTCCGA GATTGGTGAC CTGGGAGCGG 
    TTTCTTGAGG TGTGGTGCCG TTCTGGGTAA GATCGACTCT GTTGCCCTGC 
    AAGAATTCGA TGCAGGAGTA AGGGCGGCGG CAGTATGTAA TTTGGTGGGC 
    GGTTGTTGGA GAAGAGGAGC AATTTTGCCC ATCGGTTTCT TGGGTGCAAA 
    TTGAGGGCAA ATTTCGGTGA ATTTCGTCGG AAATTGAGGA AGCCCGTTTG 
    GCAATCGGTC CTGTCCATGT CCCATGCCTA GAAGCTGGGG CATTTTGGGT 
    GTGAATTGTG ACGAATTCCA GCCAATTTGG GTTGGGCCAG GAAAGTACCC 
    TTTGGGGGTT TCAGTTTGTG GTGTGATCTG CAATCTTTCC AAGATTGGTG 
    GGGAGTTCTT TGTGTGTGCT GGTGGCAAAT GGGTTGCACA CACTCCAAGG 
    TGGAGGATGA GGAGGCCGTC AGGAGGTGCA AGGATAGGAG GAAGCTGATG 
    AAGCAGCTAA TGCGGCGCCG AGTTGAGCTT GCGGCTGCAC AAACCGCCTA 
    CCTGCAGTCA CTCCGAAACA CAGGAGCCAC ACTTCGACAA TTCGCCGAGG 
    TGGAGTCTGC ATTGTCACAG CAGCCCCCTG CAGGTATTGC AGTGCATCCA 
    TCACCACCAC CACCTCCACC TCCACCTCCA CCGCCACCAC CGGTGCCAGT 
    ACCTCCTGCA TACTCAGTGA CATCCTCAGT GCCACCGTAC TCGATGACAT 
    CCTCATTGCC ACCCTCACCA CGCCCTCCAC CACCGCTACC GTTTAGTCCA 
    ATAGTGATAA GGAGGAAAAA GAGAGACGGT GAACTTGATG AGGATGATTC 
    TACAGACGAC GACGACGACA CTGACAGCTG CTCGACTCCT CTACCACCTC 
    CCCCGCCACC AGGGGTTGAG TGGGAGTACT TGGAACCTTT TGCAATGCGT 
    CCCTTAAATT TTCCATCTTC ATTGGCTGAT AGGATTGATA AAGAAGCGGC 
    CTCACAGGTG ACCATGGATG ATGATAACTG GGTGGAGACT AACACAGAAT 
    TTGATGGATA TGACGATGAA AGTGTGTCTG GTAATGTTGA AGGCATTGTG 
    AGCAGTGTCC AGTTGAATCA AGCCAAGAGT AGGGCTCTAG GTGATGACAA 
    TTCATCAATG GTTAGCTGGG TGACAAAGGA CTCAGACACT TCAGCGATGG 
    CCTGGAGGAG TAAGAAGTCG CTGGCAGGAA TTGCCAAGGA GATTGATGAA 
    TACTTCTTGA AAGCAGCGGC GAGTGGGAGT GACATCGTCA TACTTTTGGA 
    CTCTTCTGGT GGGCAGCCAG ATCCCTCAGA GTTAGAGGCA AACAGAGGAA 
    AAAATTCCAA ATCCGCCAAG GTTTTTTCCA CAATTTCTTG GAGCTGGTCA 
    TTCAAATCTG CGCAAGCTAA TAGACAATCC TCAATGCATT CAAGTGATGC 
    CTCTGGATAT GGTTACCATG GCAAAACACT AGAGAAACTT TATGAAGAGG 
    AGCAAAAACT CTACAAGTTA GTCAAGGATG AAGAATTTGC AAGGCTCCAG 
    TACAGAAAGA ACACCTCGTT GCTACAAAGA CTAGAATCAG GTGACCATGA 
    TAAATTGCAT GCAGAGAAAG TGCGAGATAA TATAGAGGAA TTGCAAGCTC 
    GGATAATCTC TTTGGAGGAA GCTGTTGGTT TGACATGTTT GTCCATATCA 
    AAGCTCAGAG ATGAGGAGTT ATATCCTCAG ATTATTGAAT TATCTGCAGG 
    GCTTGTGCAT ATGTGGAGAA ACATGTATGA GTGCCATCAG GTTCAGAACC 
    ACATTGCCCA GCAAGCCAAT CTTCTAGGCA ATTTACCAGG GAATGAACCA 
    ACAACTGACA CTCATTGTCA GGCAACATCT CAGCTGGAAG TTGAAGTTTC 
    TGCATGGCAT AGTTCATTCT GCAATCTCAT CACCTTACAG CGTGACTACG 
    TAACCATCCT TAACCAGTGG ATTAAACTCA CTGATTGCCT GCCTGATAAC 
    GATGGCTTTA TGAAAAGTTC GTCAGGAATT CGTAGTCTCT GTGCAGAACT 
    CCAGCGAGCT CTTACAGGAT TACCTGAGAA GGTAGCTGCA GAAGCAATAA 
    AGACTTTTCT GTCAGTTATA CACACTATAG TTGTACAGCA GACTGAGGAG 
    CGTCAACTGA AGAAAAAGTC CGACCAAATC GAGAGCAAGT TCCATACCCA 
    GTTAGAGAAA CACAGCAACA ATGCAACCCA AAATTCGGGC CAGCCTACAC 
    TTGCAAAGCT GGACACGTTC AAAAAGCAGG TTGAAGAGGA GAAGGCTAGG 
    TATCTGAACT CCGTGAGGAC TAGTCGAGCC ATGACACTGA ACAATCTTCA 
    GACGAGCCTT CCAAATGTGT TCCATGCTCT GATGGGGTTT TCCGGAGTAT 
    GCGTGCAGGC GTTCGAAGGT ATCAGTAGAT GCAGTGAGAT TGTCGCCAGC 
    CACTCGGGAG CAGTTTCACC TGCCATTTCT TCGTGACTGC ATCCGGCATG 
    GTTCGTTGTG ATTGTTCATT GTAAGTAGGC AAAGAAACTG GTTCTACGTG 
    AATACACTTC TCTTCCAAAA CTTAAAAAGG GAAAGAATTT AGCGACGATT 
    TTAAGTCAGT ACAGGCATAG TAGTCTTTTG AATAGATCAA CATAGTCTCG 
    ATTTGGGAAG AGGTGGATGT CTATGAGGTT ACTGGGAAAT GATTCATGTG 
    TAACTAGATA CTTGAACAGT TGAACAGTAG TCTGTTGCTG CATGTTCTCA 
    ACTTCTCAAT TCTCATTATA TGATGCTATT TTCTATTTCT CAACT

    Gene models with high sequence identity

    1. AT2G34670.2 [+] show detail - Protein of unknown function (DUF630 and DUF632)
      E-value: 8e-79; Score: 292.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Protein of unknown function DUF632 4e-94
    HMMPfam Protein of unknown function DUF630 4.9e-25
    HMMPanther BZIP PROTEIN 3.3e-73
    Coil coiled-coil 0

    See the detailed result >

    AT2G34670.2

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF630 and DUF632)
    Computational Description
    Protein of unknown function (DUF630 and DUF632); EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630) ;Protein of unknown function (DUF632) (TAIR:AT3G51290.2).
    Link
    InterPro Scan - TAIR