K12732

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K12732

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K12732

Determination of introduced cDNA(s)

  • J023100G04 - Rice Full-length cDNAs - Original: J023100G04

    full reading [+] show sequence

    Nucleotide sequence: J023100G04 - full reading 
    GTGGAGAAAA AAAAAGTAAA TAAAACGAAC AGGACGCGAA GACGAAAACC 
    CCCCTCGCCT CTCGTCTCTT TTCGTGCTCC TCCGAATCCG GTGGGTCCCA 
    CCTCCCTCAC CACGCGTCCC CGGCCGATCA CTTCGCCTCC TCCTCCTCCG 
    CTCTATTAAA CCCTCCTTCG GCCACCGCGC CTCCTCCCCT CTCCACCACT 
    CGCGCCCCCA TCACCACCCA CTCCACTCCC TCCTCCCCCG AGCCCGAGTG 
    CCTCACCGCC ACTAGCTAGC AGCAGCGGCG GCGGCGGCGG AGAAGAGGAG 
    GAGATATGGC GGCGGTGGCG GGGACGGGGG TGTTCGCGGA GATCCTGGAG 
    GGGGAGGTGT ACAGGTACTA CGCCGACGGG GAGTGGCGCG TCTCGGCCTC 
    CGGCAAGTCC GTCGCCATCG TCAACCCCAC CACCCGCCTC ACCCAGTACA 
    GGGTGCAAGC ATGCACCCAG GAGGAGGTGA ACAAGGTGAT GGAGACGGCG 
    AAGGTGGCGC AGAAGGCGTG GGCGCGCACG CCGCTGTGGA AGCGCGCGGA 
    GCTCCTGCAC AAGGCGGCCG CCATCCTAAA GGAGCACAAG ACCCCGATTG 
    CAGAGTGCCT CGTCAAGGAG ATCGCCAAGC CTGCCAAGGA CGCGATCTCT 
    GAAGTGGTGA GGTCAGGGGA TTTGGTGTCG TACACAGCTG AGGAGGGTGT 
    TCGGATACTG GGGGAAGGCA AGCTGCTGGT GTCTGATAGC TTCCCGGGCA 
    ATGAACGGAA CAAGTACTGT TTGAGCTCCA AGGTACCTCT TGGAGTAGTT 
    TTGGCAATCC CACCATTTAA CTATCCTGTC AACCTAGCAG TCTCCAAGAT 
    TGGCCCAGCA CTAATTGCTG GCAATGCTCT TGTTCTGAAG CCTCCAACTC 
    AGGGAGCGGT GGCTGCACTA CATATGGTGC ACTGCTTCCA CCTTGCTGGT 
    TTCCCCAAAG GCTTGATCAA TTGTGTCACC GGGAAAGGTT CTGAAATTGG 
    TGATTTTCTT ACGATGCATC CTGGAGTCAA CTGCATAAGT TTTACGGGAG 
    GTGATACTGG TATAGCCATT TCAAAGAAGG CTGGAATGGT CCCGCTTCAG 
    ATGGAACTTG GAGGAAAAGA TGCTTGTGTT GTGTTAGAGG ATGCAGATCT 
    GGATTTAGTG GCAGCAAATA TAGTAAAAGG AGGCTTCTCT TACAGTGGCC 
    AGAGGTGCAC TGCTGTGAAA GTGGTGCTGA TCATGGAATC CGTTGCTGAT 
    ATCGTGGTAG AGAAGGTGAA GGCCAAGTTG GCAAAACTGA CAGTTGGGCC 
    ACCTGAGGCT GACTCTGATA TCACCCCAGT TGTAACAGAA TCCTCAGCAA 
    ATTTTATTGA GGGTTTGGTC ATGGATGCCA AGGAGAAAGG AGCAACCTTT 
    TGTCAGGAGT ACAGGAGAGA AGGCAACCTT ATCTGGCCGT TGCTACTGGA 
    TCACGTCCGG CCTGACATGA GGATTGCTTG GGAGGAGCCA TTTGGCCCTG 
    TCTTGCCTGT GATTAGGATC AACTCGGTCG AGGAAGGCAT CCACCATTGC 
    AATGCCAGCA ATTTTGGGCT GCAGGGATGT GTATTCACTA AAGATATCAA 
    CAAAGCGATC ATGATCAGCG ATGCGATGGA GACCGGAACC GTTCAGATCA 
    ACTCTGCACC GGCTCGAGGA CCTGACCATT TCCCCTTCCA GGGCTTGAAG 
    GACAGTGGGA TTGGATCCCA GGGGATAACT AACAGCATAA ACATGATGAC 
    CAAGGTGAAG AGCACTGTCA TAAACCTACC ATCTCCATCC TACACCATGG 
    GCTGAGGTGT TCCATATAGA TGATCAGATT TCTATAACCA CATGAGTACA 
    ATGTAGAGAA TTCAAATGTT TTGTAACCAC GTGAGCTTTG TACGCTATTT 
    GCACCACAGT TCTCCCTGTA TGTTGTTGGC TCTTTTACAA TTAAGAATAA 
    TGCATGTTGA AGTATG

    Gene models with high sequence identity

    1. AT2G24270.4 [+] show detail - aldehyde dehydrogenase 11A3
      E-value: 0; Score: 871.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D Aldehyde dehydrogenase, N-terminal 7e-76
    PatternScan Aldehyde dehydrogenase, conserved site 0
    PatternScan Aldehyde dehydrogenase, conserved site 0
    superfamily Aldehyde/histidinol dehydrogenase 4.8e-136
    HMMPanther NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEH 0
    HMMPanther Aldehyde dehydrogenase 0
    HMMPfam Aldehyde dehydrogenase 8.1e-136

    See the detailed result >

    AT2G24270.4

    Model type
    Protein coding
    Short Description
    aldehyde dehydrogenase 11A3
    Curator Summary
    Encodes a protein with non-phosphorylating NADP-dependent glyceraldehyde-3-phosphate dehydrogenase activity. The activity of the enzyme was determined from leaf extracts; the enzyme has not been purified to confirm activity.
    Computational Description
    aldehyde dehydrogenase 11A3 (ALDH11A3); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1).
    Link
    InterPro Scan - TAIR