K12738

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K12738

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K12738

Determination of introduced cDNA(s)

  • J033080C14 - Rice Full-length cDNAs - Original: J033080C14

    full reading [+] show sequence

    Nucleotide sequence: J033080C14 - full reading 
    GGCCGCCGCC GCCGCCACCG CCGCCGCACT CTGCAACCGC GCCGCGTGGA 
    GGGAGGGAAG GACGAAGGAG GAAGGAGATG GAGCGGGTCG GCGGCGGGGA 
    GAAGCAGCTG GAGGACTGCA CCGTGTCCAA TGCTCTCGGC ACCTGGTTCT 
    TCTCAGTTGC TGGTGCTCTT GTTGCTATTC CTGTGGGGAT AAAGAAGAAA 
    TCCTTGGCAC CACTGGTTTT CTTTGGCACT ACTGGAACTA TGCTTGATAT 
    CATCATGGGC ATTAGCCAAT GCGAGCGGGA GCATGCTGAG CGGCAGATGA 
    AGCTTTTAGA AGCTCAAAAC CTTTCTGCCA ATGCTTCAGC AGATGGTGAA 
    AACTGATCAA GTTCTTTGAT TATTAGGACA AGCAAAATGC AGCTGTTGTT 
    TTTCGTAACT TACTAGTTGA TCTGTAATTG GCATGATCTT CTGCTCTTGT 
    ACAAATTTGT CCATCCAAAA TACGGAAATC TTGATATTTT AAATATTCTC 
    CAATAAGTAT ATTGAGCAGT GGTTAATCCT TG

    Gene models with high sequence identity

    1. AT1G21930.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G42150.3); ...
      E-value: 3e-30; Score: 127.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G21930.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G42150.3); Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR