K12907

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K12907

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K12907

Determination of introduced cDNA(s)

  • J033115M19 - Rice Full-length cDNAs - Original: J033115M19

    full reading [+] show sequence

    Nucleotide sequence: J033115M19 - full reading 
    GACCACCACC ATAAAAAAAC ACCGGGAGGA GGAGGAGATA GATGGGCAAC 
    TGCGGGACGC GAGAGGAGAA TGCCGTCGTC GCGGCGCACG CCCAAGTTCA 
    GCAGCTCCAC TTGCTACAAC ATCCTGTCAA GAATGCTGTT GCAGAGAGGA 
    AGCACACCCG CATCTCATCA GATATGAGTG ATCCTTCAAC ACCTAGGAAA 
    ATTGAAGTTG AAGATGCCAA GAACATCTCC ATATACAACG ATGTGATTGA 
    CTTATTGTTT GAACTTGAGA CCATCACAAA AAGCTTCCGT GCTGACTACC 
    TTCTTGGTGA AGGAGGGTTT GTGACTGTTT ACAAGGGCTA CATAGATGAG 
    AATGTCAGGG TTGGTCTGAA GTCACTACCT GTTGCAGTCA AGGTGCTCAA 
    CAAAGATGGA CATCAAGGAC ACAGAGGATG GCTCGTGAGT TGCCAACTTG 
    TTCAATATTC ACTATGGTTG CCATCATAAG CCCACCACAT GTGGTGAGCT 
    TACGATGACG ACCACAGTTT GTTAAGCATG CGAGCCGCAT GCGGCAGATC 
    GTGTGATTCA TTTTCTGTTG TGGAATGTAT TATATATTAT CGTATACCTA 
    TATTCTTCAC TCAAAAAAAA ATCTCATTTT GTTC

    Gene models with high sequence identity

    1. AT5G01020.1 [+] show detail - Protein kinase superfamily protein
      E-value: 4e-33; Score: 137.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G01020.1

    Model type
    Protein coding
    Short Description
    Protein kinase superfamily protein
    Computational Description
    Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G05940.1); Has 117465 Blast hits to 116000 proteins in 4235 species: Archae - 97; Bacteria - 13843; Metazoa - 43298; Fungi - 9750; Plants - 33095; Viruses - 372; Other Eukaryotes - 17010 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR