K13033

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K13033

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: K13033

Determination of introduced cDNA(s)

  • J013023D24 - Rice Full-length cDNAs - Original: J013023D24

    full reading [+] show sequence

    Nucleotide sequence: J013023D24 - full reading 
    GGCGCGCGCG TGAGTGCGTG ATTTGTGTTG GTTGTCTTCC TCTTGGCTTC 
    GCTTCGCTGC TTTGCCGCGC CTTCGCCGAG GGAGGCCGAC CAACGCATCA 
    ATCAAACACA CAAGCACACC ACGCGGACGC AGCAGCAGGG GAGGAGACAA 
    TTTCCTATTC TTCCTCGCCC CGCGTCGCCT CGCCTGAGTC TGACTCTCCA 
    AACGCCGACC AGTGACGCCG CGAGCCTTGC CCCTTGCCCG CGCAGATCTC 
    ACCAAACCCT ACCAGATCTG CGCCCCGCCA TGGACTCCGC CGCCGGCGGT 
    GGCGGCCTCA CGGCCATCCG CCTGCCCTAC CGCCACCTCC GCGACGCCGA 
    GATGGAGCTC GTCAGCCTCA ACGGCGGCAC CCCCCGCGGA GGCTCCCCCA 
    AGGACCCCGA CGCCACGCAC CAGCAGGGGC CCCCCGCCGC CCGTACCACC 
    ACAACCAGGA AGCTCGTCCT CGCCTGCATG GTCGCCGCCG GCGTGCAGTT 
    CGGCTGGGCG CTTCAGCTCT CGCTCCTCAC GCCCTACATC CAGACCCTAG 
    GAATAGACCA TGCCATGGCA TCATTCATTT GGCTTTGTGG ACCTATTACT 
    GGTTTTGTGG TTCAACCATG TGTTGGTGTC TGGAGTGACA AATGCCGTTC 
    AAAGTATGGA AGAAGGAGAC CGTTCATTTT GGCTGGATGC TTGATGATAT 
    GCTTTGCTGT AACTTTAATC GGATTTTCTG CAGACCTTGG TTACATTTTA 
    GGAGATACCA CTGAGCACTG CAGTACATAT AAAGGTTCAA GATTTCGAGC 
    AGCTATTATT TTCGTTCTTG GGTTCTGGAT GTTGGATCTC GCAAACAATA 
    CAGTTCAAGG TCCTGCTCGT GCCCTTTTAG CTGACCTTTC AGGTCCTGAT 
    CAGTGTAATT CTGCAAATGC AATTTTTTGC ACATGGATGG CTGTTGGAAA 
    CGTTCTTGGT TTTTCATCTG GTGCTAGTGG GAATTGGCAC AAGTGGTTTC 
    CTTTTCTAAT GACAAGAGCA TGCTGTGAAG CTTGTAGTAA TTTGAAAGCC 
    GCTTTTCTGG TTGCAGTTGT AAGTTCTCTT AAATCCCGCT GCTGCGCCTG 
    CAGTAGAAAT TTCAAGCTGT TTTGTAACAG CCTGCAGAGC TAGCAGGTCA 
    TTCTTAGGAA TTGCATGTGA TATTATTTTG TGGAGTGTGG ACTGTAATGT 
    GTGCAAGCTG ATAAGCCCTA CTATGCAGGT ATTCCTTTTG TTTTGTATGT 
    CTGTTACCCT GTACTTTGCT GAAGAGATCC CGCTGGAACC AACAGATGCA 
    CAACGATTAT CTGATTCTGC GCCTCTCCTG AATGGTTCTA GAGATGATAA 
    CAATGCATCA AATGAACCTC GTAATGGAGC ACTTCCTAAT GGTCATACAG 
    ATGGAAGCAA TGTCCCAGCT AACTCCAACG CTGAGGACTC CAATTCAAAC 
    AGAGAGAATG TCGAAGTTTT CAATGATGGA CCAGGAGCAG TTTTGGTGAA 
    TATTTTGACT AGCATGAGGC ATCTACCTCC TGGAATGTAC TCTGTTCTTC 
    TAGTTATGGC TCTAACATGG TTGTCGTGGT TTCCCTTTTT CCTTTTTGAT 
    ACTGACTGGA TGGGACGTGA GGTTTACCAT GGGGACCCAA ATGGCAACTT 
    GAGTGAAAGG AAAGCTTATG ACAACGGTGT CCGAGAAGGT GCATTTGGTT 
    TGCTATTGAA TTCAGTTGTC CTTGGAATTG GGTCCTTCCT TGTTGATCCA 
    CTATGCCGAC TGATGGGTGC TAGACTGGTT TGGGCAATCA GCAACTTCAC 
    AGTGTTTATC TGCATGCTGG CTACAGCAAT ATTAAGTTGG ATCTCTTTTG 
    ATTTGTACTC AAGTAAACTT CACCACATCA TTGGAGCAAA TAAAACAGTG 
    AAGAATTCAG CCTTGATTGT TTTCTCCCTA CTTGGACTGC CACTCTCGAT 
    CACATATAGC GTTCCTTTTT CTGTGACTGC TGAGCTGACT GCTGGAACAG 
    GAGGTGGACA AGGTCTGGCA ACAGGAGTCC TGAACCTTGC AATCGTTGTT 
    CCGCAGATAG TAGTGTCACT AGGAGCAGGT CCATGGGATG CTCTCTTTGG 
    GGGAGGGAAC GTCCCTGCTT TCGCCTTGGC TTCCGTTTTC TCACTAGGAG 
    CTGGTGTCCT CGCGGTCCTT AAGCTACCCA AGCTGCCAAA CTCTTACAGA 
    TCTGCTGGGT TCCATGGATT TGGCTGAGCA GAACACCAGC CGCATGGTGT 
    GTAACATTGA GAAATGCAAC TCCATTTTGC CATTCGTTTA CAGTGAAATG 
    ATTCTTTTTA CCTACTACTA CAACAGAATA AGCTGAAAAG ATAGAGATTA 
    GGATAGAGAG CTAGGTAACT AGTCCAGTTA GGTTGATGTG CATACAAGGC 
    AATTGGAAGG TGTAAGAGCT GTATCTACTT TTTTGACAGA AAAATGTAAG 
    CTCTGCCCGA ATGACATGGC GGATAGATTT TACAATGGAT GTAATCATGT 
    ACTATATATA ACACGTTTTG GTCACAGCTT GCCAAGTTTC ATGTATAGTA 
    CTGCTACT

    Gene models with high sequence identity

    1. AT2G02860.2 [+] show detail - sucrose transporter 2
      E-value: 2e-100; Score: 363.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Major facilitator superfamily, general substrate transporter 2.8e-17
    superfamily Major facilitator superfamily, general substrate transporter 9.8e-06
    HMMPfam Major facilitator superfamily MFS-1 8.8e-10
    HMMPanther SUCROSE TRANSPORT 1.2e-129
    HMMPanther SUGAR TRANSPORTER 1.2e-129
    HMMPanther SUCROSE TRANSPORT 5.4e-70
    HMMPanther SUGAR TRANSPORTER 5.4e-70

    See the detailed result >

    AT2G02860.2

    Model type
    Protein coding
    Short Description
    sucrose transporter 2
    Curator Summary
    encodes a sucrose transporter in sieve elements and a number of sink tissues and cell types. Gene expression is induced by wounding.
    Computational Description
    sucrose transporter 2 (SUT2); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sucrose-proton symporter 2 (TAIR:AT1G22710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR