K13121

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K13121

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K13121

Determination of introduced cDNA(s)

J013162H04 - Rice Full-length cDNAs - Original: J013162H04

full reading [+] show sequence

GCTTCCTCTC CCTTCTCACG CTCGCCCTCA CCAGCTCTCC GTCATTCCGC 
CTCCCGTTGA CCGGCGCTCC TCCACATCTC CTCTCCATGG TCGCGTGGAT 
CCGCCGTCGG CGGCGACGGC AGGGGTGGAT CCACCGAGCT CCATCATTTG 
TCCGCCCCCG CTCGCGCCGA TCCACCGCCT CTCGCGTCGG CAGCGACGGG 
AGGGGTGGAT CCGGCGACCT CCGTCGTCTC TCCGCCCCCG CTGACGCCGA 
TCCACCGCCT CTCCCGTGGA TCCGCCGTCG ACGGCGACGG GAGGGGTTGA 
TCCGGCGACC TCCGTCGTCT CTCCACCCCC GCTCGCGCCG ATCCGCTCGG 
GCTCGTCGTC GCGTCGTTTG TGGGCTGCTT CTTCACGTCC GTCGCCTCGC 
TCATCATCTC CAAGCTGCAT CCGCCGTCGG CAGCGACGTG ATGGGCGGAT 
CCAGCTTCCC TTCAGTCCCA ACTCTGTCTG GGTGTCCAGG AAGAGACCGG 
CGGCGGGGAG GGCCAGAATG GCGGCGGTGG TGAGGGCGGA GGCGGTGGAC 
ACATCCATCA GCCCAACGAT GAGGGCGCTC CGGTCGTCCA AGAACATGGC 
CATCACAGAC CAGGCCACGA CGTTGCGGCA GGCCGGCGAG CTGGTCATCG 
GCCTCGCTGC AGGGGAGCCC GACTTCAACA CACCGGCCTC GCTACCGAGA 
CGGAGTTGGG TTTAGATCTT TGCTGGTTCT TTTGCGGTGA TCGGTGACGG 
TGAGGGACGG CGCCCTCCCT GGTCGTGGGA CCATGCAGAG GGAGACAGGA 
GGTCTGGACA GCGACACCGT GGGACAGCTT GTCGGCCAGG TGATGATCAG 
CGCTCCCTCA GCGGCGAGCG ACATCCCGGT CCCCCTTTGT GAGAAGGGTC 
CGGTCGAACG CGTCGCTGCA ATTAATGCAG CGGCGTCATT GAAGGAGGGC 
GTCACCAATG AGGCGTCCGA CGTTGCAGCT GCTGCTACCA CGAGTGGCAA 
CAACGTTCCG AGGAAGGGGA GGAATTCTCC TCCGTACTCG GGACCCGTCG 
GAAGGCGCCA AACCCGGCGG ACTCGGACGC GTCTCCCCAC CTCAGCGAAG 
GCAAAGGCTA GTGACTAGTG ACGATCGGCG AGAAGGCGGC GCAGGCGAAG 
GCGGCGCAAG GTGGGACCGG TGCGGCTTCC AGTGCGTCCC CTGCAGTGAC 
CTCGACAGAT GTAGTGGTCG CTACTAAGGA CCGGGAGGCG ACGTCGAGTA 
GCCCCGCCGT CAACCTTGTG TCTGCTCGGG GCCCGTCGAC CGATGCCCTC 
ACCTGGGGGG AGCTCCAGGC GGAGATGGAG CGCCTCCTCC AGGCCGGTGC 
TCGGGGCGTA GGCCGCGAGG TCGAGGAGGC CAGGGCGGCA GCGTCGTCAG 
CAAACCAGCG TGCTGACCAG CTGGTACGTG ACTTGGCGGA GGCCCGTGAG 
GACCTCCTGA AGATGAGGGA GCTGGTGGCC GGCAACGAGA GGCAGCGGCA 
AGGGCTCGAG CACCGGATGT TGGAGCTCGA GAACAATCCG TCAGAAATCC 
GATGCTCGCT GCGGGTATCG TACACCAGCC TACACCAGCT CGCCGGGGAA 
CGTGGTGTCA CGACTACCAG CTGGCCTGCA AAATTTGCAC ATGAACGTAC 
TACTTGCCTA TAGATGATGG TGGTGTGGCC GTGTGGGCAA TATTGGGTGC 
ATATGAAAAT GCTGCAAGAA AAAAAAAGGG TGCCCTTTAT ACCGATCAAG 
AAAAAGAAGT GCATTTTAGC TTGATCAAGA ACTAACCCAA AAGCAGGCTA 
CTCGTCAACA CTGTTTCACT CCCTCTCAGT GATATGTGTT CATGTCTATT 
CGGCCAGCAA GCACATTGCG TTCGTCAATA CATGCTGTCA CTGCCCTTTT 
GATCGCCCGC AGAAGAGCCA CCCCAGCATG CACGCAGACA ACAAGACAAC 
AACAAGCTTT GAGTTGAAGG GAAATCCAGA TTATATATTT GATATTAGTT 
AATTCAGTGT CTCAAAAAAT ATCATCAACT CCAATTTGAT GACCAAAAAT 
CCTCTGCAAA ACTGATAATT TTACAACCTT GATGCTACAG ATCAAATAAC 
AGGACTGAAT GTGCCCTAGC TCCAAATATC ACAATATAGG TGGTATGTGT 
TCCTATCGGG CTAACCTCAC CTACTTCAGG GAAGAAATTG GTCAGCAGCC 
ATACTTGGAT AATGGCAGCA TGACCGTCGC CGTGGCCTCG CACCGCCAGT 
GGCCGGCGCA CGCGCAACAC ACCAGGTCCT TCCGCTTTGG TCACCACTTG 
CCACTCTTTG CCTCCATTAA TGACACCACC TCAGCGACTA GCCACCATAG 
GTTTGGCCCC AACAATCACT TGAAATGAAA GTTGAGATTA CAAATACGGC 
AAGCAGGAAA GCCGGTGAAA TCAAACTGCA GCATCATGCC ATTCTCCTCT 
CAAATATGGC CGTAAAGCAA CACAAGAAGG GATGTTTTTA CCTCTCAAAT 
CTGTTTGCCG ACACCGCCGC TGTGGTGGAG GAGGAGGCCG CCATGTAACA 
CAGAACAGTA ACACAAGAAG GATGGCAGTG TTTTATCAGA CTTGATTTGT 
ACCTGAAGGG CGGCATGTTG GTGGGGAATG CGTAGATGCA GAGAACCATC 
TCCATCGGCC GGCATGCTTG GTCCGCCACA AACCGCACCG GATCTCATCG 
CTGTGTTCTT GTATCCGCCC CTGCCGAGAG CTAGCTATCC ACATCGTCTT 
CACCGAGTTA CCTCGCCGGG ATTGCTCGCC ATGCCGTGAA GAGGGCCGAC 
GTCCGTGGTT TTCGTCACCG ACGACGTTCG TCCACAAGCC TCTTGCTGGA 
AACCAGAACT CCTCAACCAT TTTTGTCAAG CCATCACAGC GCCTGATGTC 
CAAGTGCCTT TTCGCTGCCG TCGCTGGTTG TTCGTGAGCT TCGGAACAGA 
CATTATTCAC CAGCGAGCTG CATTACCTGA AAGCATGCCG CGGCTTCCAA 
AGTGTGCGAG CATGAGAAGA AATGTGAAGC GTCGTTCCAT TCATGATGAT 
GATGACTTTG TCACTCCACC TTCAAGGAAG AAGGCTGTTC GTGTTAAATT 
CGTGGCACCG GTTTCGCGTT GTGTACCATC TTCCATCACA CCTATCATAC 
AGAGATTTAG TGCTGAAAAG AAAGAGCTGG TAGCTGAGAT AATTATGTCA 
TTCATCTTGT GGGATATACA TGTATACGTG TTCGCTCTGT CACTCATAAA 
CCTATGTGTA CATGTACACC TGTAAAAGTA CAGATTATGT CATTAATCTT 
GTGGTATTCA GACGTGC

Gene models with high sequence identity

AT2G22250.3 [+] show detail - aspartate aminotransferase
E-value: 1e-07; Score: 56.20

InterPro Scan Digest

Program	Description	E-value
HMMPanther	SUBFAMILY NOT NAMED	0.00032
HMMPanther	FAMILY NOT NAMED	0.00032
Gene3D	Pyridoxal phosphate-dependent transferase, major region, subdomain 2	0.00024
Coil	coiled-coil	0

See the detailed result >

AT2G22250.3

Model type: Protein coding
Short Description: aspartate aminotransferase
Curator Summary: Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity.
Computational Description: aspartate aminotransferase (AAT); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G77670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR