K13222

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K13222

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K13222

Determination of introduced cDNA(s)

  • J013124D13 - Rice Full-length cDNAs - Original: J013124D13

    full reading [+] show sequence

    Nucleotide sequence: J013124D13 - full reading 
    GCCTCAGATC CGTGTGCTCG GCTCCTTCCT CCCCTCTTTT CTCCCCGCTT 
    TTCCCATCCA ATCCCGGCGG CGGCGGTGGC TCGGTGACGA GAGGAGTAGC 
    AGTGGTAGTG GTGGCTCAAT GACGAGGAGG GGCGGCGAGA GCTCGGCGAC 
    AGGGAAGGGC GGCGAGAGCT CGGTTCCTCC CTCCCCTCTT CTCCTCTCCA 
    ATCCCGGCGG CGGCTCGGCG ACAAGTAAGG ACGGCGGGAG CTCGGCTCCT 
    TCCGGCAACT GATGGGAGAA GACGCCCCTT GTGGAGAGCT GCTGCCGGTG 
    CTGCCGTCGT CGTCAGCGCC GCCGTCGCAA CCAAGGGGAC ACGGCTTCCT 
    TGCTGGAGAG CTGCTGCCGG TGTTGCCGTC GTCGTCCTCC CCCGCCGATT 
    ACGAGTGCTA CGTCCACTAC ACCGAGTAAA CCTGTCGAAT GGGAGGCACC 
    ATCATAATTA TATGATCCAG CATTATGAAG TAACCATCAA CTGATCTAAG 
    CTGGGAGAGT ACTGTAAGCT GTGGCACCGG GGATGGCCAA CCTCATTGGC 
    TACTGCTGCG ACAGCGACGA GCGGCTTCTC ATCGCCGAGT TCATGCCCAA 
    CGACACCCTC GCCAAGCACC TCTTCCACTG AGTTTCCTCC CTCCCTCCAG 
    TCCCCTGCAA TTTAACTCCG GGTCTCTATA TTCCCCTCCC ATTTGATGAT 
    CCTACCAACG ATTGGATCCT TTTGGTCATA ATGGATGTTG CTGTGTTTCG 
    TGTGCTACCT CTTCAGTTCT GTAGTTACGC AGCCAATGGT GCAGCGAGCT 
    TGGATTTTTA TGATGAAATG GCTAGCTTCG GTAGCTGATT TAGAATTTTG 
    CAGCGGCAAA ATAAAAAGTG ATAGCTGAAG GAAAATCTTG GATTCATGAT 
    GAATCGGAAG CAGCAAGGAA GCATATGTCC TTTGTCGTTT GATTGGCCTC 
    AACACTCAGG TCAACCTCAA TAAGGTTTTT GTCTATTCTC TTAATGTTAC 
    CTTGCTAATT CAAGATCTTT TGATTCGTGT GACTTGGATA TGACTTTGCT 
    TAGGTCAATG TGTGAACGAC TATTTGGCAT TTGGCTGGAT TTGGTGGTCA 
    GTGACTTGTA CTAGTGATGT ATTGACCTGG TCAGTGAACC TGTGATGTAA 
    TTGAACATGT TTTGGATGGT GATTTGTGGA TGTAATTAAC TGACTTGTCA 
    TGTAACTTAC TTGAGGATAA CATGTGATCT TTTTTTTTCT GAATTTGTGA 
    TAGCCTGTTT TGTGAATTTG TATTAAATAT GAGCTGAATG TTGTC

    Gene models with high sequence identity

    1. AT4G35230.1 [+] show detail - BR-signaling kinase 1
      E-value: 3e-12; Score: 70.10

     

    InterPro Scan Digest

    See the detailed result >

    AT4G35230.1

    Model type
    Protein coding
    Short Description
    BR-signaling kinase 1
    Curator Summary
    Encodes BR-signaling kinase 1 (BSK1), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized.
    Computational Description
    BR-signaling kinase 1 (BSK1); FUNCTIONS IN: binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway, N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G59010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR