K13245

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K13245

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K13245

Determination of introduced cDNA(s)

  • J013149L10 - Rice Full-length cDNAs - Original: J013149L10

    full reading [+] show sequence

    Nucleotide sequence: J013149L10 - full reading 
    GGTCGCGTCC GAGGCTTTGA ACCCTAGCGC ACCAATGGCG ACGGCGACGG 
    CGACGGCGGC TGCGGCCGCC CCGGCGGCGG TGCCCGCGCT GGTGTCCCCC 
    TTGTCCCGCC GCGCCTTCTT CCCGCTCCCT CGTCGCGCCG GCCCCAAATC 
    GCTTCGGGTC TTCGCGTCGG CGGCGAGGCG ACGTGGGTTG GTCGTGGTGG 
    CGGCGGATGC GGCAGCGGCG GCAGGTGGCG CGGAGTTCAG CGACGAGGAG 
    AACCCCTACG AGATTCTGGG TATTACCCCG CTTGATAGCT TCGACCACAT 
    GAAGCTGGCC TACAAGAGGA AGCACAAGGA AGCGGACGAG AATGGAGATC 
    AGTACTACCT GTCAAAGTTG GAGAAGGCAT ACGACACTGT GATGATGCAG 
    CAGCTGCAGT ATAGGAAGAA AGGAGTAACA TATGGTTCTG TTCAGGTGTC 
    GAAGGATATC AAGTATGCTG ATGACCAGCC AATTGTTCCT TGGGGACCTA 
    GATCCTCCAA ATCAACAGTA AAGGACATGC GCATCAATTT AGGAATATCA 
    GCAGCCATTG TTGTTTGGAT AGCTATCATG GGCAATGCGG ACTGGAAGCC 
    ATTGCAGTTC CTATGTTTTG CTTTCTTCTA CAGAATACTT CAAAAGCTAA 
    GGGCTACTGA ACCACCAATA ACGCCAATAT ATAATGAGTA TGGTGAGGTT 
    GAAGGACGTG GAATACGAAT GGCAAAACGA GTAGTCCGTG CTTTGGGTTT 
    GATATTTGGA TGTGTATTTG CCGCGTCATT GGGTTATACA GCAGCTGTTA 
    ACGTGATTGA GTTTTCATGG CAGTATACTC CACGCATTGT TTATTACTAT 
    CAGGAGTTGA TTGTTACAGC AGCTACCGCT GCTCTGCTGT ACATCACAGC 
    CTCATACTAC CGGTAAACAG ACAGTGGAAT TACAGTCTGG CTAAGAGAAC 
    CATGAGATGT TAGGATATGA GCTGAGATTC GGTGAGTGGC ACACTTGTGG 
    ACTGGTGTTA CCTCAGGCAT TAATGGAGAG TCAAGAGTTC ACAAATTTTG 
    AAGTATAATT GGGCCGGCTT TTGAGTTAGA TACTGTTGAA TATGCGCTTG 
    TATTGCACAG TTGTGAACCT CCTCACTGGG CGTAAGGCGT CGGCTGATGA 
    AAAAAAAATA GTGTGCATAT TTTAACAGAA ATGTAATGTA TGAGATTATA 
    TCAGATTCTG GTATTTTCCT TCCCTTTTTT TTTCCTTTTG AGGGTGAGAG 
    ATTCTGATTC TTGTTAAAAA CTTGACGAGT AGCCCAACAA AATAACTTGA 
    CAAGTACTTT C

    Gene models with high sequence identity

    1. AT1G08640.1 [+] show detail - Chloroplast J-like domain 1
      E-value: 2e-60; Score: 230.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G08640.1

    Model type
    Protein coding
    Short Description
    Chloroplast J-like domain 1
    Computational Description
    Chloroplast J-like domain 1 (CJD1); LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 82 Blast hits to 80 proteins in 30 species: Archae - 0; Bacteria - 24; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR