K13251

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K13251

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K13251

Determination of introduced cDNA(s)

  • J033119O19 - Rice Full-length cDNAs - Original: J033119O19

    full reading [+] show sequence

    Nucleotide sequence: J033119O19 - full reading 
    GATTGGCAGT TTGGCACTCG AATCTCCGCC ACACCACATC CCGGCCGCGC 
    CCCCGGCCTC GCGGGCGTGT CACCCGGAGA CTGAGCGCGC GGCGCCGCGT 
    TGGAGTCACG CCACGCCATG GAGAGAACCG TGGTGCTGTA TCCCGGCCTC 
    GGCGTCGGCC ACCTGGTGCC GATGGTTGAG CTGGCCAAGG TGTTCCTCCG 
    CCACGGCCTC GCGGTCACCG TGGCAGCCGT CAAGCCGCCA CTCGACTCTC 
    CCGATTTCTC CGCCGCTGTC GCGCGCTTCG CGGAGTGCAA CCCCGCCATC 
    AACTTCCACG TGCTGCCGCC GCCGCCGCCA CCGCCCGCGC CCGTGGGCTC 
    CGGCTCCGAC GGCAAGTCCG CGTCCCCGAT CGTCGGTATG CTCGGGTTCC 
    TCAACGCCAT GAACGCGCCG CTCCGCGACT TCCTCTGCTC GCTGCCCTCC 
    GTGGACGCGC TCATCGTCGA CATGTTCTGC ACGGACGCTC TCGACGTCGC 
    CTCCGAGCTC AGGTTACCGG TCTACGTTTT CTTCACCTCG GCCGCCAGCG 
    ACCTCGCCGT CTTCCTCCAC CTAACCAGCA TGCGAGATAG CATCAACACA 
    AGCTTCGGGG AGCTCGGTGA CTCCATGATC CACATCCCGG GCTGTCCTCC 
    GTTCAAAGCT TCAGAGTTAC CATCAGATAT TCTCAGTGAC AACGAAGCAT 
    CCAGGCTTAT CTTACTGATG TTCCGTCGGC ATCCAGAGTC GAGAGGAATT 
    CTTGTCAATA CATTCGAGTC GCTGGAGACG CGCGCGTTGC GCGCTCTGGA 
    GGACGGGCTC TGCGTCCCCG GCCGTGCCAC GCCGACGGTC TACTCCATCG 
    GGCCAATCGT CTCGGGTGGC GGTGGCAGCG ACAAGGATCA CGACTGCCTC 
    CGGTGGCTGG ACGCGCAGCC GGACAACAGC GTGGTGTTCC TCTCGTTCGG 
    GAGCTTGGGA AGGTTCTGCA AGAAGCAGCT CGAGGAGATC GCCATTGGCC 
    TGCAGAAGTC GGAGAAGAGG TTCCTCTGGG TCGTGCGGAG CCCGCGCATC 
    GACGAAAAGA ACGTGTTCGA GCCGCTGGCG GAGCCAGACC TCGACGCGCT 
    CCTGCCGGCC GGGTTCATGG AGGCGACAAG GGGGAGAGGG CTCGTGGTGA 
    AGCTATGGGC GCCGCAGGTG GAGGTGCTCC GCCACAGGGC GACCGGCGCG 
    TTCGTGACGC ATTGCGGGTG GAACTCGACG CTTGAGGGGA TCACGGCGGG 
    GCTGCCGCTG CTGTGCTGGC CGCTGTACGC GGAGCAGAGG CTGAACAAGG 
    TGTTCGTCGT GGAGGAGATG AAGCTTGGCG TGGAGATGAG GGGCTACGAC 
    GAGGAGGTGG TGGTGGCGGA GGAGGTGGAG GCGAAGGTCA GGTGGGTGAT 
    GGAGTCCGAG GGCGGCCAGG CGCTCAGGCA GCGCGCGGCC GCGGTGAAGG 
    ATGCGGCGGC CCAGGCGATC AAGGAAGGGG GCTCGTCTCA TGCCGCGTTT 
    TTCAAGTTCC TCGAGGACCT GCCGCTGCAG GTCTCCAGAG GCATGGTTAG 
    TGCATGATTT CGAGCCATGG TAATTTGTCG GGCACTGTGT TTACCTGCGA 
    CTGTGAGCAA CATAATTTGA GTACTGTATG GTTCTCTTAG GATTGGATAA 
    TGGATGTTCT TTCTGATAAC ACGAGATATC GGTGGGCACT GAGCATGGTC 
    ATCCATGTAA GAGTACACTG TTATCGGTGG ACATTCGGCA TAGTCATCCA 
    TGTAAGTGTG TGTACTGTGT AGTGTCTATT GTTTACTCTC TCCATTTCAA 
    AATATAAATA TTTTTAGCAT AGTGATAAGT T

    Gene models with high sequence identity

    1. AT3G16520.3 [+] show detail - UDP-glucosyl transferase 88A1
      E-value: 2e-75; Score: 280.00

     

    InterPro Scan Digest

    Program Description E-value
    PatternScan UDP-glucuronosyl/UDP-glucosyltransferase 0
    Gene3D no description 2.1e-11
    superfamily UDP-Glycosyltransferase/glycogen phosphorylas 2.5e-46
    HMMPanther UDP-GLUCOSYLTRANSFERASE 2.8e-118
    HMMPanther UDP-glucuronosyl/UDP-glucosyltransferase 2.8e-118
    HMMPfam UDP-glucuronosyl/UDP-glucosyltransferase 4e-25

    See the detailed result >

    AT3G16520.3

    Model type
    Protein coding
    Short Description
    UDP-glucosyl transferase 88A1
    Computational Description
    UDP-glucosyl transferase 88A1 (UGT88A1); FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1); Has 7523 Blast hits to 7470 proteins in 455 species: Archae - 0; Bacteria - 255; Metazoa - 2062; Fungi - 26; Plants - 5000; Viruses - 120; Other Eukaryotes - 60 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR