K13324

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased length (PATO:0000574) (Seed::Shape::short)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K13324

Determination of introduced cDNA(s)

J023092O07 - Rice Full-length cDNAs - Original: J023092O07

full reading [+] show sequence

GGCACACTGC TTCTCGCTCC CGCTCTGAAC TTAACGCTGC AAAAAAAATC 
TTGGAGTGTA TAACTGTGTA AGCTTTGCTC AATGGCGGAG GAGAACAAGT 
CCGGCTCCGG CGACCTGATG GCGAGCGGCA AGGTGGTCGC GGAGGCGACC 
ATGTCGGTGT TCCAGCAGAA GAGCGTGGAG GGCGTCGACA AGAAGGAGGT 
CGCCGGCGCC GCCGCGGACC TGCTGCACTC GGCGTCCACC TACGGCAAGC 
TCGACGACAA GCCGGTCGGG CAGTACATCG ACAAGGCGGA GGGGTACCTC 
AAGGACTTCA GCTCCGGCAG TGGCGGCGCC GCACCGCCAC CGCCGGCAGC 
CGGAGACGCC GCAGCGCCGA AGCCAGCGGC GGAGGAGCCG CCCAAGGAGC 
CTGCGCCGGC TGAGAAGGAG GAAGGCAAGC CACCGTCGTC GTCGGAAGGG 
TTCGGTCTCG ACGACGTCAT GAAGGGGGCC GAGTCGCTGA TGGAGAAGAA 
GGGCGGCGGG GAGGAGAGCG CCGGCAGCGG CGGCGCCGCC GGTGGGCTGT 
TCAAGATGGC GCAGGGTTTC ATGAAGTAGG AGAGCTCTTT GGCTGGATAT 
ATAGCTGCAT GCATGCTTGT CTCTGGATTG TGGCTCTGCT TTAATTTGCT 
TGTTAATTAA CTGATGATCT GTATGATGTT TTGTAAATGT CTCTCAGCTC 
TGTTGTTAAT TTTGTGTGGT GAATAATAAG AAGACAGCTA CTTTGTGTGT

Gene models with high sequence identity

AT1G13930.3 [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; EXPRESSED IN: 25 ...
E-value: 0.000000000007; Score: 67.80

InterPro Scan Digest

See the detailed result >

AT1G13930.3

Model type: Protein coding
Curator Summary: Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress.
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nodulin-related protein 1 (TAIR:AT2G03440.1).
Link: InterPro Scan - TAIR