K13427

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K13427

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K13427

Determination of introduced cDNA(s)

  • J013037F14 - Rice Full-length cDNAs - Original: J013037F14

    full reading [+] show sequence

    Nucleotide sequence: J013037F14 - full reading 
    GACTGGTTCG GTGTGAGCGA GCGAGCGAGA TAGCCATATC TTCGCTGTGC 
    GTCGTCGTCG TCGCTGCGTG GTGAATTCTT GGGGAGGAGG AGGACGAGAT 
    GGCGGGAGGC GGCGTGGCGG CGCTGGGGGT GAAGAAGGAG CGGGCGGCGG 
    AGTACAAGGG CCGCATGACG CTCGCCGTCG GCATGGCCTG CCTCGTCGCC 
    GCCGTCGGCG GCGCCATCTT CGGCTACGAC ATCGGCATCT CCGGGGGAGT 
    GACGTCCATG GATCCGTTCC TCAAGAAGTT CTTCCCGGTG GTGTTCCGGA 
    AGAAGAACGA CGACGGCCAG AACAACTACT GCAAGTACGA CAACCAGGGC 
    CTCTCGGCGT TCACCTCCTC CCTCTACCTC GCCGGCCTCG TCTCCTCCCT 
    TGCCGCCTCG CCGGTGACGA GGAACTACGG CCGCCGCGCC AGCATCGTCT 
    GCGGCGGCCT CAGCTTCCTC GCCGGCGCCA CGCTCAACGC CGCCGCCGTT 
    AACCTCGTCA TGCTCATCCT CGGCCGCATC CTGCTCGGCG TCGGCATCGG 
    CTTCGGCAAC CAGGCCGTGC CGCTGTACCT GTCGGAAATG GCGCCGGCGC 
    ACCTCCGCGG CGCGCTGAAC ATGATGTTCC AGCTGGCGAC GACGCTGGGC 
    ATCTTCACGG CGAACATGAT CAACTACGGG ACGCAGCACA TCAGGCCGTG 
    GGGGTGGCGG CTCTCGCTGG GGCTCGCGGC GGCGCCGGCG CTGCTGATGA 
    CCGTCGGCGG GCTGCTCCTG CCGGAGACGC CCAACAGCCT GATCGAGCGC 
    GGGCGCGTCG AGGAGGGCCG CCGCGTGCTG GAGCGCATCC GGGGCACCGC 
    CGACGTGGAC GCCGAGTTCA CGGACATGGC GGAGGCGAGC GAGCTCGCCA 
    ACTCCATCGA GCACCCGTTC CGCAACATCC TGGAGCCGCG CAACCGGCCG 
    CAGCTGGTGA TGGCGGTGTG CATGCCGGCG TTCCAGATCC TGACGGGCAT 
    CAACTCCATC CTCTTCTACG CGCCCGTGCT GTTCCAGAGC ATGGGCTTCG 
    GCGGCAGCGC GTCGCTCTAC TCCTCAGTCC TCACCGGCGC CGTCCTCTTC 
    TCCTCCACCA TCATCTCCAT CTCCACCGTC GACCGCCTCG GCCGCCGCAA 
    GCTCCTCATC AGCGGCGGCA TCCAAATGAT CATCTGCCAG GTGATAGTGG 
    CGGTGATCTT GGGGGTGAAG TTCGGGACGG ACAAGGAGCT GACGAGGAGC 
    TACTCGATCG CGGTGGTGGT GGTGATCTGC CTGTTCGTGC TGGCGTTCGG 
    GTGGTCGTGG GGGCCGCTGG GGTGGACGGT GCCGAGCGAG ATCTTCCCGC 
    TGGAGACGAG GTCGGCGGGG CAGAGCATCA CGGTGGCGGT GAACCTCTTC 
    TTCACCTTCG TCATCGCGCA GGCGTTCCTG TCCCTGCTCT GCGCGCTCAA 
    GTTCGGCATC TTCCTCTTCT TCGCCGGGTG GATCACCGTC ATGACCGTCT 
    TCGTCCACGT CTTCCTGCCG GAGACCAAGG GCGTGCCCAT CGAGGAGATG 
    GTGCTCCTAT GGAGGAAGCA CTGGTTCTGG AAGAAGGTCA TGCCCGACCT 
    GCCGCTCGAG GACGGCGACA GTCATCACAA GTGAAAGAAA TGTACTCTGA 
    GATAGTATAT GGGGGTTACA GTAGATGAGA CATGACATGT AGGATGAGGA 
    GATTAAGATT GATCATGTGC GGTAATGCAT TCTGTGTGTA TGTTAATTGA 
    AGTTCATGGA TCATGATGTC TGTTTGTCGT GGCAGAGAAG AGAAATATTG 
    GAAACACAAA ATTTTATACT ACTCGATTAT TAATTGTCTG AATCCTCGTG

    Gene models with high sequence identity

    1. AT4G02050.1 [+] show detail - sugar transporter protein 7
      E-value: 0; Score: 709.00

     

    InterPro Scan Digest

    Program Description E-value
    FPrintScan Sugar/inositol transporter 4.1e-29
    FPrintScan Sugar/inositol transporter 4.1e-29
    FPrintScan Sugar/inositol transporter 4.1e-29
    FPrintScan Sugar/inositol transporter 4.1e-29
    FPrintScan Sugar/inositol transporter 4.1e-29
    HMMPfam General substrate transporter 3.3e-123
    Coil coiled-coil 0
    superfamily Major facilitator superfamily, general substrate transporter 3.7e-56
    HMMTigr Sugar/inositol transporter 4.6e-124
    HMMPanther MONOSACCHARIDE TRANSPORTER, PLANT 9.6e-219
    HMMPanther SUGAR TRANSPORTER 9.6e-219
    PatternScan Sugar transporter, conserved site 0
    ProfileScan MFS 43.939

    See the detailed result >

    AT4G02050.1

    Model type
    Protein coding
    Short Description
    sugar transporter protein 7
    Computational Description
    sugar transporter protein 7 (STP7); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G26340.1); Has 26348 Blast hits to 25870 proteins in 1897 species: Archae - 376; Bacteria - 11847; Metazoa - 3711; Fungi - 6732; Plants - 2516; Viruses - 0; Other Eukaryotes - 1166 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR