K13624

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K13624

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K13624

Determination of introduced cDNA(s)

  • J023146D23 - Rice Full-length cDNAs - Original: J023146D23

    full reading [+] show sequence

    Nucleotide sequence: J023146D23 - full reading 
    GGTTGCTGCT GCTTCCGGCG GCGGCGGCGG CTGTGTCCCT CCCTCCGTCG 
    AACAAGGTGG TGTTCATCCT GGGAGGGCAG TCGAACATGG CGGGGCGCGG 
    GGGCGTGGTG GGGTCCCACT GGGACGGCAT GGTTCCCCCG GAGTGCGCCC 
    CCAACCCCTC CATCCTCCGC CTCTCCCCGC AGCTCCGATG GGAGGAGGCC 
    CACGAGCCGC TCCACAACGG CATCGACTCC AACCGCACCT GCGGCGTCGG 
    TCCCGGGATG TCCTTCGCTA ACGCCCTCCT TCGCTCCGGC CAGTTCCCTG 
    TCATCGGCCT CGTCCCCTGC GCCGTCGGCG GCACCAGGAT GGCCGACTGG 
    GCCAAGGGCA CCGACCTCTA CTCCGATCTC GTCCGCCGCT CCAGGGTCGC 
    CCTCGAGACC GGCGGCCGCA TCGGCGCTGT CCTCTGGTAC CAGGGGGAGA 
    GCGACACCGT GCGCTGGGCC GACGCCAACG AGTACGCCCG CCGGATGGCC 
    ATGCTCGTCC GCAACCTGCG CGCCGATCTC GCCATGCCAC ACCTTCTCCT 
    CATCCAGGTA GGACTAGCAT CAGGGCTTGG GCAATATACT GAAGTAGTAA 
    GGGAAGCTCA GAAAGGGATC AAACTTCGAA ACGTGAGATT TGTTGATGCA 
    AAGGGTTTGC CACTAGAAGA TGGCCATCTG CACCTTAGCA CCCAAGCGCA 
    AGTCCAGCTT GGACATATGT TGGCTCAAGC CTATTTGAAC TATGGTACTT 
    CCACGCTCTA GTCCTCTCTG TGTTGTTTTT CTTTTATCAG ATAAATAGCT 
    AAGAGACTAC GCACCTTATG TTCTACTTTT CTTATTTAGT TTCATGGACC 
    ACTCATTCTT ATGATTATTG AATTGGCTTG GTATAATTAA ATTTTCCG

    Gene models with high sequence identity

    1. AT4G34215.2 [+] show detail - Domain of unknown function (DUF303)
      E-value: 7e-71; Score: 264.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G34215.2

    Model type
    Protein coding
    Short Description
    Domain of unknown function (DUF303)
    Curator Summary
    Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds.
    Computational Description
    Domain of unknown function (DUF303) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT3G53010.1); Has 345 Blast hits to 345 proteins in 104 species: Archae - 2; Bacteria - 231; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR