K13712

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K13712

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K13712

Determination of introduced cDNA(s)

J033035H01 - Rice Full-length cDNAs - Original: J033035H01

full reading [+] show sequence

GGGCGGGCGG CGGTTGCCGT GGCTGCAGAA GACGACGAAG CGGCGGCGGC 
GCCACCTGTC CACCTCACGC CCCACGCGTC CGCGCCGCAG GCTACCCTCC 
TTGCATGGCG GCATGGCGCG GCGCCTACTT CGGTGCTTCC CTTCAACCAC 
CTCGGTGTCC CGTAGAGTCG TAGGCGTGGT ATTGTCGCGC GCGGAGAAGA 
GGGGAGGGAT ATGGCGGCGC GGTGGTGCTT CGCGTTGCTC TTGGCGCTGT 
CGGCGGCCGC GGCGGGGGCC GGAGCCAAGC GGACGTGGGA GCCGGTGATT 
CGGATGCCGG GGGAGGTGGT GGAGGAGGAG GTGGCCACCG TGCCGCGCGG 
CAGCGAGGGC ACCGAGGAGG AGGAGAAGGA CGGCGTCGGG ACGAGGTGGG 
CGGTGCTCGT CGCGGGCTCC TCCGGCTACG GTAACTACAG GCACCAGGCT 
GATGTATGCC ATGCATACCA GATATTACGG AAGGGAGGGC TAAAGGAGGA 
GAACATTGTC GTGTTTATGT ATGACGACAT TGCCAATAAT ATACTTAACC 
CGAGACCAGG GGTTATTGTC AATCATCCAC AGGGTGAAGA TGTTTATGCA 
GGAGTTCCGA AGGATTACAC TGGAGACGAA GTCACTGAAA AAAACTTTTA 
CGCGGTTCTC TTGGGCAATA AAACTGCAGT TACTGGGGGT AGTAGGAAGG 
TCATAGATAG CAAACCAAAT GACCACATAT TTATCTTCTA CTCTGATCAT 
GGGGGTCCTG GAGTTCTTGG TATGCCCAAT CTGCCATATC TTTATGCTGC 
TGACTTCATG AAGGTGTTAC AAGAAAAACA TGCCTCCAAT ACTTACGCTA 
AAATGGTTAT ATATGTAGAA GCGTGTGAAA GTGGCAGTAT TTTCGAAGGT 
TTGATGCCAG AGGACCTTAA TATTTATGTC ACAACAGCGT CTAATGCAGA 
AGAGAGTAGT TGGGGGACGT ACTGCCCAGG AATGGAACCA TCGCCTCCTT 
CCGAGTACAT CACCTGCTTA GGTGACCTAT ACAGCGTTTC TTGGATGGAA 
GACAGTGAGA CTCACAATCT GAAGGAGGAA TCAATTAAGA AGCAGTACGA 
AATGGTTAAG AAGCGTACCT CTGACATGAA CAGCTACGGT GCTGGCTCTC 
ATGTTATGGA GTACGGGGAC AGGACATTCA AGGATGACAA GCTTTACCTA 
TACCAAGGTT TCGACCCTGC AAATGCCGAA GTTAAGAACA AGCTATCATG 
GGAAGGCCCA AAGGCTGCAG TCAACCAAAG AGATGCAGAT CTTCTTTTCC 
TCTGGAGAAG GTATGAGCTG TTACATGACA AGTCCGAAGA GAAGCTGAAA 
GCTCTGAGGG AGATCAGTGA CACTGTTATG CATAGGAAGC TTCTTGACAG 
CAGTGTTGAT CTTGTCGGAA AACTTCTCTT TGGATTTGGA AATGGGCCTT 
CTGTGCTTCA AGCTGTTAGA CCTTCTGGTC AGCCACTCGT TGATGATTGG 
GATTGTTTGA AGAGAATGGT ACGGATCTTT GAGTCGCATT GCGGACCGCT 
CACTCAGTAC GGTATGAAGC ACATGAGGGC GTTTGCTAAT ATTTGCAACA 
ACGGTATCTC TGGCGCTTCA ATGAAGGAAG CAAGCATCGC TACTTGCAGC 
AGTCACAACT CGGGTAGATG GAGCTCGCTG GTGCAGGGGT ACAGTGCTTG 
ATCTGCCGCA ACACGTGATA TAGCCTCAAA ACTTATGCCT TGTACTCGTA 
CTTCCTCAAA ACAATACCTT CAGGACTGCA AATAACCGTC CAAGGATGTA 
CCGCTGTATG CTACTGTACC TCTATGTGTG CAATATAGAT GCCCTGTATA 
TACGAGTATA TGAATGAATC GTGTGCTTTT ACATGCCC

Gene models with high sequence identity

AT1G62710.1 [+] show detail - beta vacuolar processing enzyme
E-value: 0; Score: 651.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	VACUOLAR PROCESSING ENZYME-RELATED	0
HMMPanther	Peptidase C13, legumain	0
FPrintScan	Peptidase C13, legumain	7.9e-56
FPrintScan	Peptidase C13, legumain	7.9e-56
FPrintScan	Peptidase C13, legumain	7.9e-56
FPrintScan	Peptidase C13, legumain	7.9e-56
FPrintScan	Peptidase C13, legumain	7.9e-56
HMMPfam	Peptidase C13, legumain	5.4e-113

See the detailed result >

AT1G62710.1

Model type: Protein coding
Short Description: beta vacuolar processing enzyme
Curator Summary: Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteases that is expressed specifically in seeds and is essential for the proper processing of storage proteins.
Computational Description: beta vacuolar processing enzyme (BETA-VPE); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress, vacuolar protein processing; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: gamma vacuolar processing enzyme (TAIR:AT4G32940.1); Has 785 Blast hits to 783 proteins in 241 species: Archae - 4; Bacteria - 10; Metazoa - 274; Fungi - 115; Plants - 253; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink).
Link: InterPro Scan - TAIR