K13815

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased width (PATO:0000599) (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K13815

Determination of introduced cDNA(s)

J013099L16 - Rice Full-length cDNAs - Original: J013099L16

full reading [+] show sequence

GGTTGTTTTG GACGAACGCG AGCTGACAGA GGGGAGAGAG AGAGAGAGAG 
AGAGAGAGAG AGAGAGTCAG AGAGATGCGG CGTTGCAGTT GCTGGCAGCT 
ATTGTGGCTG GTGCTTGTGT GCTCATGGCG GATCGCTGCA GCTCAGGCTC 
AGGCGGCACC AAGAACCGAT CCAACCGAAG CGGCAGCTCT GAACACAATC 
CTGGGAAGAT GGGGCAAGAA AGCATCATCA GAGTGGAACA TCAGTGGCGA 
GCTTTGTAGT GGCCTGGCTT CCGACAAGAC CAACTGGGAT GACTACCCCA 
ACATCAACCC ATTTATCAAG TGTGACTGCT CCTACAATAA CAACTCTGTC 
TGTCACATTA TCAAATTGTA TGTACGCCCC TCGTCTTATT TTGATCAGCT 
GCACACCTGG TGCTTGTTTA CTACTCCATA CTTCCTCTGC TTTTTAATGC 
ATGGCGATGT TGAATTTTGG ACACACGTTT GACCATTTGT CATATTCAGA 
AAGAATTTGC AAATATGAAA AAATGTAAGT CATCCTTACC TTAATAAATG 
TTAATTATGT AATTTTTTAA TAAGCCAAAT GGTCAAAGAT ATTTCCAAAA 
GTCAATGATA AAACAAGTCA CAACAAAATA AATGTTAATT ATGTAATTTT 
TTAATAAGAT ATTTCAAAAA GTCAATAGTC ATTAGTTTAG AAAAGTAACA 
TTGCTTCTGG CTGCATAATT TTTGTAGTAG TGTAAAAAAC TAAACCAGGC 
ACGATTAATA GGAAAGAATC AGATTCAGTG GCTTGTGGTT AGATAGTCTG 
GTTGATCAGT GTTACCCAAA AATATTTGAA TGCACCAACA ATGTTCTAAA 
CTCACATCCA CTGGGTTAGG AATAATAATG ATATTGGAAA GATCCAAACT 
CACATCCAAA AATATTTGAA CTTGCAAGAG AACCTCGTAT CATTATATTA 
GGAAGAAGAA AGGGTAGAAA ACCCTAAGTA CACACACCCT CGCACCCTTA 
ACTCTTAGAG TACATGTGCG CCTATAACAA CAGATTACAA ACGACCACGA 
CCTGAACATA ACCACTGGGT TCTAGGGCAG TAAAGAACGA AAACCCTTGA 
GCCCCAGCCA AACACCAAAG TCGGCCCTCT TCCTTTGCAA GCAGTACGGG 
GCCTGCCAAG TTTTGGATAA CACCATAAAG AACAAAGCGA TTTCGATGCT 
TCCAAAGCAT CCAAGCACCA ATAAATGATG AGAGGGTTGA GGCCCTGACG 
TACCAGGCCG CTAATTGCCT CACTGGCCTG TTCCACCATT CCTCAAAGCA 
CTGATCTGCA AGCATAGGGG CCAAGGTGTT CAGATCATAC CTCTATAGAA 
GGATGAACAA AAATTGTCTT GCAAAGATAC AGCTCGTGAG CAAGTGACCA 
GTTGTCTCGT CATCGATATG TTCACAGGAC TATAAATATT TACAAACAAT 
AAGATATAAT CTAGGTGTGA CGATTAACAA TAGAAATTTT CTTTCTTCGA 
ACATGCAGGA GATCTGCATA TCATTTCATT AAGCAAGGAA AAAATAACCG 
AAAAAAGGAC TTACAAGACA CCCACACGG

Gene models with high sequence identity

AT1G56130.1 [+] show detail - Leucine-rich repeat transmembrane protein kinase
E-value: 6e-16; Score: 82.80

InterPro Scan Digest

See the detailed result >

AT1G56130.1

Model type: Protein coding
Short Description: Leucine-rich repeat transmembrane protein kinase
Computational Description: Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G56140.1); Has 183160 Blast hits to 131873 proteins in 4617 species: Archae - 129; Bacteria - 16542; Metazoa - 50297; Fungi - 10850; Plants - 82984; Viruses - 436; Other Eukaryotes - 21922 (source: NCBI BLink).
Link: InterPro Scan - TAIR