K13927

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K13927

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K13927

Determination of introduced cDNA(s)

  • J023061G06 - Rice Full-length cDNAs - Original: J023061G06

    full reading [+] show sequence

    Nucleotide sequence: J023061G06 - full reading 
    GACCCTCTCT CCCTGTGTTT CCTTCACATC CACTCTCCCA TCCAGATTCC 
    CAAGCCCATC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCCACTCCAG 
    TCGAGGCACG GCCGGCTCCC CCCGCGTCGC CGGCGAGCAG GGCACGGGCG 
    TGTCGCGCTC GCGGACGGCC TCCCCTCCCC TCCCCTCGTC CTAGCCTTCT 
    CCTCCGTGCG GCGCACGGCC GGCGAGGCCA CCCAGGGTTG GTGACCCAAG 
    GGGGGCGAGA GCGCGGAGAC GCGGCCCCCC CATCCATCTC CGTCTCCCCC 
    GTCCGGATCG AATCCGAGGT CTATAAATGG CAGGAAGACA CCGCATACCT 
    CGTGAATACT ATGATGAACG TCGAGGATTT CGTGATGGCC CCCCCACCTC 
    CGCTTGCTCG AGCAAGGCCC ATCTCTCCAC GTCGCTTGGA GGAGGAGCTG 
    TCTAGCCGCC GTGCTGAGAT GCGCAGAATC CATGATGACA ATCAGCGCCT 
    AGCTGATGAA ATTGTTGGTC TCAGGCAGGC AATGCCTCGT CTGAAGGAAG 
    ATCTCCATGC CGCAAGTCAA GCTATACCCA AGCTTCGTGC AGAAAAAGAA 
    CTTGAGTCAA GGGAGCTGAC TCAGAGGAAT CTGAAGTTGG AAGCTGAACT 
    ACGTTCCTTA GAACCCCTCA GGCAAGATGC CTTACAGCTA CGGTCCGAGG 
    CCGGGAAACT ACAGTCAATA AGGCAAGAGC TGACTGCAAA GGTGCAGGGG 
    TTGTTAAAAG AGCTTGAGCA TCAGAATTCT GAGAACCAGA AATACCTGTC 
    ATGATAGCTG AACGTGATGC TCTTCGGCAG GAACTAGTCC GAATGAGGGG 
    AACCCTTGAG TACGAGAAGA AGGCAAGGCC TGATCTGACA GCACAGGTGC 
    AGGCAATGGA GAAGGATCTT GTTTCTATGG CTCAGGAATC TGAGAAGCTG 
    AGGGCTGAGA TTAAGAAGAG AAATGCACCC AGTTTCAGCG GCCATGGAGC 
    TTATGGACCA CCAATGGCGA CTCCAGGGAT GGGCCTGCAA GGCGTCTATG 
    ATGATGGCTA TCCTTCCATA GGCAGCCGCT ATGGCACTGG ATCTTGGGCA 
    CCACATGATC CCCATGGTTA TCCACAACTG TGACTGGGCT TCTGATCGTT 
    CTTCCCTGGG CAGTGCTTTA TCTTCGTAAT ATCGCTTGAT GGTTGATACT 
    GATCGTGACA AAGCTTTTCT CTTAGTAGAA CTTGTGGTGC ACAGTAGATG 
    GTCTTTTGGG GGTGCACTTC AAGTGTTGTT AGTTTAGCAT ATGTAGCAAT 
    ATACCAGCTA TGGTTGCCTT GGTACCTCTC CAAAAAATGT AATCAATGAT 
    GACTGTAAGA GGGAATTCAG TGCAACGAAG AAGGAAAATA GGAACTTAAG 
    CTTTACAAGA TGCAAGTTTG CGTATGAATA TAACAAGGTG GAATCAGTC

    Gene models with high sequence identity

    1. AT1G55170.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); ...
      E-value: 3e-27; Score: 64.30

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0

    See the detailed result >

    AT1G55170.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 13439 Blast hits to 8993 proteins in 828 species: Archae - 344; Bacteria - 1469; Metazoa - 6958; Fungi - 1008; Plants - 683; Viruses - 29; Other Eukaryotes - 2948 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR