K14016

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K14016

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K14016

Determination of introduced cDNA(s)

  • J013106B15 - Rice Full-length cDNAs - Original: J013106B15

    full reading [+] show sequence

    Nucleotide sequence: J013106B15 - full reading
    GGGTCTCCCT TTGCTTCTTC CGTTGCAATT CCATTCTCCT CTCTCTCCTG 
    CTTCTCTCTC TCCTCCTCTT CTTCACCTCC TCTTGTCTGT CCATAGATCG
    AGCCGCTCAG ACCAAATCTT GGATGCGTTC TCTCTTCTTT CTCGCTGCGA
    GGGAGGCGGG TTGTTCGATC TGCGGGTGAA ATCGAGCGAG AGATCCCTAG
    ACCTCCCCCT ACTTCTCTGT AGCTGTACAT ATTTCAAGAG AGGAAATTTT
    GGGCTGGTTT CTGATACGGT TCGAGAAGAT TTTTGGCAAT TTCTTCGGAT
    TTTCCTCCCC TTGTGGGTTC CTTGGTTCAT TGAGAAGAAT CAAATGGGTG
    ATGTGTCAGT CAATCGACCG ATCAAGGCGG AGCCAGCTGC AGGCGGCATT
    GCTCAGGGCA ATCGAATCCT GGACATGATG TCGTCAGGGT GGACAGATGA
    GCGGCACATG CATTATATAA GCTCAATGGA GGCTTCTTTC GTTGAGCAAC
    TCTACAATCA CGAACAAAAT GATGCTGGCA ACGGATTCAA GGTTCTCCGT
    GGTGGGGTGT GGGAGAAACT CAAATTTGAT CGGACCAGTG CTTGCTCACG
    GATCGGGAGA AAATACTGCC TGCCCGCAAG CCCCTGGATC CAGCATTTCA
    GGCCGCGCGA ATGCAGTAGC AATGCAAGGA ATGATGCGGC GGAGGCTTTA
    GTGGGTGATC ATGAATCTGG TATTCAGACT ATCCAAGGGA GGACTCCGTT
    GTCACATGGA AGGGAGTGGG AGGCTTGCAA GGAAGAAAAA GCTGTTGGTG
    AAAGTACAGA GGTCTCTGAT CAGAATTTTG CTGATGATGA GGCGGAGGTT
    GATGCAGAAT CAAGCAAAGC ATGCAAGAGA AGGAAGTTAA GAAGTGCTCT
    TACACGGAAT TACCAAGTTG TTCCATCTGA CAAACTGTTT GCTTCCACAA
    AAGCTGATGG AAGGAAAGAT GCTCCAGAGT AAGGCATGCA AGAGTGGATC
    TGGTTGAATA TGCAGTCAAT GAGAACTGGA TGAGTTAGTA TTGGCGATTT
    AGTAGTATAG TTCTGAACTC TGTAGAGTCT GTCTTGGTAG AAGAATAATA
    GGATCGATCA CTCACAACAT GGTAGATTTA TTGTTTGATC ATATTGTTGT
    AATGGTTTTT TTTTGTGTGT GTTGCTGTGT TCTGGCAACT GTTTGTTTGC
    AATGTGAGTA ATATGTTTAT GTTTGCCACA AGATGAGAAT GATGCAAAGC
    CCATCATTCC TTTTGCCATA ATTCCATTGT ACATACATGT ACTCCCATCA
    TGATATTGAG AATGAAAGAT CACCAATTTT GCAGAATG

    Gene models with high sequence identity

    1. AT5G42900.2 [+] show detail - cold regulated gene 27
      E-value: 2e-13; Score: 74.30

     

    InterPro Scan Digest

    See the detailed result >

    AT5G42900.2

    Model type
    Protein coding
    Short Description
    cold regulated gene 27
    Computational Description
    cold regulated gene 27; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G33980.1); Has 74 Blast hits to 74 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR