K14050

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K14050

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K14050

Determination of introduced cDNA(s)

  • J033086K19 - Rice Full-length cDNAs - Original: J033086K19

    full reading [+] show sequence

    Nucleotide sequence: J033086K19 - full reading 
    GAATCCCACC ACGCACCGGA GCGAGAAGAA GAAGAACCCA ATCATTTCCC 
    TCCCTCCCTC CCACCGTCGT CTCGTCGCGA ACCCGCGAGA ATCCCAACCT 
    CCTCCTCCGC TTTCCCTCCT TTCTCCTTCC CACCCGCGCT ACCGAGCAGA 
    GCACTGCTTG GCTCGGCTGG CTCTTGCGGT TCGAGGTCAG TCGCCTGGCG 
    CCGCGCGCGG CGGGCGAGGG GGTCGGTTGA TGGTGCCATG TGGCCCCTGG 
    GGTTCTTCTC CGAGAGGCTG TTCAAGGTCG CGGGGGAAGG GGACGGCGGC 
    GAGGGGGCGG ACGACTCGCC GCCGGCCCCT GACGGCCGTG TCCCTCTAGC 
    CCGCCGCTCG TACTACGTCG ATGTTCCGCA TGTCCAGCAG GCCTTCACGT 
    GGGACTGCGG CCTCGCTTGC GTGCTCATGG TGCTCAGGAC ACTCGGGATG 
    GATTGCTGCG ACGGCATTGC CGATCTCGAG AAGCTCTGCC GCACCACGAG 
    GTTCCTCTCT TGGACTAGAT TATTACTTCA AATTTGAGTT TACAACTAAA 
    CACGGGGGGC GCAATTCTCC TTAGTTAATG AAAAAAATTG ATACCCCGAA 
    TCATTTGTTT ATTCATGGAT AATTATTCTT CTTTTCTTTA TGAGATTGCG 
    TGGATAACGA ACAGTGATTA CTCTGTCAGT TCATGAATGC TTGTTACTAC 
    TTTGACCACT TGATTGTTCC CACATTTTGC ACTGCATAAT CACTTTTATC 
    CGGTGTAGTT AAAATGCTCT TTGCAAATAA TTCCATCTTA GGTGAAAATT 
    AATTTGGAAG AGAATAAAAA ATTGTGCATT TCAATTGTAA TATGACAATT 
    ATTTATGAGG ACATAAAGTA GCTTAGACGT GAGAAATATT CGTGGATATA 
    TTATATTGCA ATACAATCAT TCCCTAGATG AGCTGGACAT AATATTTAAT 
    TCTCTTTAAT TTTGGCCTAT TAAAAATTTT AATAGCACGT CTGGTGTATT 
    AACAATCTGA CATTTCTGGG TTGTGCAGCA TATGGACAGT TGACTTGGCA 
    TATCTGTTAA ACAGGTTTTC AGTTTGTTTT TCCTTCTTCA CTGTGACTCT 
    AGGAGCAAAT CCGCAATATT CTGCTGAAAC CTTTTATAGG GAGCAATTGC 
    AAGAAGACAT TGATCGAGTG GATGAGCTCT TTGGCAGAGC CCTTGAAGCT 
    GGAATTAGTA TTCAAATCCA TCAGTGCGTA TGATATAGCT TTTCTACTGT 
    TATCTGGGCA CTGCATTGCT ATCGCACTAG TGGACAAAAC AAAATTGAAG 
    TAAGGGATTT TTTTGGTCAT AGCAAGTGAG ATGAAGTATA CTTTGTTCTG 
    TATTTCTGTC AATACTTTTA CTCCTTTAAG ACAGTCTTAC ATTTGTCTTC 
    GGCATTCAGA CATCGCCTCA TAAGCAAGTT GTCCAATGGT AAATGCAATG 
    GGTGGACAAT GTTACTTGCT GTACTTGTCT CATTTTAATA TCTCAAATTC 
    TTTTGATTTA ACGATCATAA GGTGATTATT AGTTTAATAT TTTGCAACCG 
    TGCCAACATT ATGTAGTAAC AAACTGATAA TGTTGATGAA GCAGTTGAGT 
    AATATACAGT TGGCACTACC CTTTCTGTTC CCAAAGTTAC TTGGTAATTG 
    AGAGAATATC TCGGAGAAGA TTACAGTTCG GAACAAAATG GTTCATGGAT 
    GTATCCATGG ATTTTTATAT GCATAATTTT TCTACAAACA ATAACCATTG 
    TTCCTTGATT TCATTTTTGA AGTGGCTGCA TATCATTTGA AATGGGCAAT 
    AATAGTGTGT CAGTAACTTG ATTTTTGGAA TGCAGTTCCT CATGGAGCAA 
    TGATCTACAA GATATGCAAC AGTTCAGTGA GGATTCAGAT TACATGGGGC 
    ATTATGTTGT AATATGTGGG TATGATGCTG ATGCTTGCGA ATTTGAGATA 
    AGGGACCCTG CCAGTTCGAG ACAGCGTGAA AGGGTGTCAA TGAAGAGCTT 
    AGATCAGGCC CGCAAGTCCT TTGGAACTGA TGAGGATATT ATTTTGGTAG 
    GAATAATACT AGGTGCCTGT TTCAATCTGC TATTGTTCAT ATTTAAATCT 
    TGCATATACT TGTCACTCTT GAGTTTACAT TAACTTCTAG TCTTACCATT 
    GAGCATATTG CACGTTTCGC TATTTATGGA TGCAGTTCAC ATAACATGTT 
    AATGCAATCC CAGCCCACTT ACTGAGTACT CGTTTGAGCA TAGTTCACAA 
    GCCAATAATT TAAGCATTGA TTTGCATGGT GTTTTGCAGG TTTCTTTAAC 
    TGGAAAAATT GGAATGAAGC TCTCACGTAA ACTCCTGGTG GGCTCCTTGT 
    GAAAACCTCA ACTCCCTGGT TCCATGTGTA TATACGTTGT ACATGCCACT 
    GTAGTTATGA TTGTCATCTG TTAAGTCATG TATGTAGTTC AAGATCATTC 
    TTACAGCTAT AGGAACTGTG AGCTAGTGAA GTACCCAGTT AGGTTTGTTA 
    GCTCATGGCT CATCACACTG AAGCTGCAAA GGACGCAGCA GGCAGCAGCA 
    ACAATGCTGC GCAGGAACTA CTCTTGTAAG CAAGAGCAGC TTCTGTAGCG 
    AGCAAAAGTC ATACCGTTAT AGCCGGACAG AGATGTATCA TATGTACATA 
    TATCCTTGCA TC

    Gene models with high sequence identity

    1. AT5G05930.1 [+] show detail - guanylyl cyclase 1
      E-value: 9e-22; Score: 35.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Guanylyl cyclase 8.6e-13
    HMMPfam Guanylyl cyclase 3e-27
    HMMPfam Guanylyl cyclase 2.5e-28

    See the detailed result >

    AT5G05930.1

    Model type
    Protein coding
    Short Description
    guanylyl cyclase 1
    Computational Description
    guanylyl cyclase 1 (GC1); CONTAINS InterPro DOMAIN/s: Guanylyl cyclase (InterPro:IPR018616); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR