K14241

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K14241

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K14241

Determination of introduced cDNA(s)

  • J023035M20 - Rice Full-length cDNAs - Original: J023035M20

    full reading [+] show sequence

    Nucleotide sequence: J023035M20 - full reading 
    GATTTCGACT CGGGGCTCCG GCCGGCCTCT TCTTCTTCCG GTGAGCCACC 
    GACAATTCGA TTCTTACATT TCGTGATCGA TCGATTGATT TCGTGTTGTA 
    ATCTTGCGTG ATCGATCATG GTGTGTCAAT TAATGGCAAG GGCGTGGTCA 
    TGGAGCCCCA GCCCGGCTCG CCGGAGACCG CCGAGCTGCC CGCGCCTATG 
    GTGCTAGAGC CGCCGCCGCC GCCGTCAGAT GAGGCGGCGG CGGAGGAGGA 
    GGAGGCCGGC GTTAAGCCTG ATAGGCAATC ATCTTCATCG TCTTCGTCGT 
    CGTCGTCGGA GGAGGAGAAG GAGGTGTCCA AGGACGTCGC GGTAGAGACC 
    AGCGTCGTCG TCCCGTCGGT GGTCGCCGCC TCGCCGGACG ATGAGGCCGC 
    CGCCGTCGCT TCCGGTGACG GCGGGGACGT TATCAAACAC GACGATGAGG 
    CCGTGGTCAG ACCGGACGAT TGGGCATCGT GGCCGCAGCA GCCGGCTCAG 
    ACCGTCGACG ACGTAGCGGC GGCGGCGACG ACGACGCCGC AGGCGGCGCC 
    GGAGATCCAG ACGATGTCGC TGCAGCCGGC GGCGGTGGCG GGGTTCGATC 
    CGGAGAGGAT CCCCAAGTCC ATCTTCCAGG CGAAGCCCCC GGGGTCGTCG 
    TCGCAGGCGG AGTGGAGCGT GGCGTCGAAC GAGTCGCTGT TCAGCATCCA 
    CCACGGCGCC CGGCCGTCCG GCGACCTCTG CGGCTTCTAC GCCGGCGAGA 
    GCAGGTCGCA TTTCGACTAC TTCTACGACG AGGCCATGGC CGGCGCCGCC 
    GGCGACCACA CGTCGGACTG GAAGCTGGCC ACCGTCGCCG AAGGGTCGCC 
    TGGTGGCAGC GCGCGGTCGG ACGCCACCGA CGGCGGCGGC GGCGCGGCCA 
    AGCAAAAGGC GGCCATCGAC TTCCGCCGCC ACGAGAGCGG CTCCGCCGGC 
    AGCTCGAGCA ACTTCTCCTT CGCCTTCCCC ATATTGGCGG AGACGACGAC 
    GTCGCAGAGG AAGAGGGACT ACGGCGGGAT GTACCATCCG CTGAAGAAGG 
    AGGCGGAGCA GCAGCAGGCG GCGTCGCCGG CGTCGGCGTT CGAGGAGATG 
    ACGCCGGAGG AGGAGCGGCG GCGGCGGCGG AGCTGGTGGT GCTGCTGCTG 
    CGGCGAGTGC TGCGGCTGCT GCTGGTTCGC CTGCTCGTGG TCGTCGTGCT 
    GCTGCTGCTG CCGGTGGCGG TGGTGCAGCC GCTGCAGCTG CAGCTGCCCA 
    ACCTTCTGCC GCCGCAACTA GTGCCTCTCT GCTCCTGACC AAGACATTTT 
    TGGCGGGAAA AGATGAAGGG AAAAAACCGA GACCAACTCG GCTAATCCTG 
    ATACAGCCAT AGTTAAATTA ATTATTGCTA CCAGATTAGG CATCACTGCA 
    TGAGAGGATC ATATCATATG TATGCATGTG CAGATGGGTA AAAAGATGAA 
    GATGATATTG TTCACTGTTG ACAAGGAAAT GTTATGCTAA CCTGCAGATG 
    GGCTGAGGT

    Gene models with high sequence identity

    1. AT3G02125.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 4e-07; Score: 53.50

     

    InterPro Scan Digest

    See the detailed result >

    AT3G02125.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G39200.1); Has 2247 Blast hits to 1434 proteins in 202 species: Archae - 4; Bacteria - 111; Metazoa - 942; Fungi - 239; Plants - 140; Viruses - 37; Other Eukaryotes - 774 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR