K14246

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased width (PATO:0000599) (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K14246

Determination of introduced cDNA(s)

J033132N22 - Rice Full-length cDNAs - Original: J033132N22

full reading [+] show sequence

GTGTAGTTTG GCTGCTTGAC CTTTGTACTG TGCTTGTGCT GTGGTCGCGG 
ACGACGATGG CTGCGCGGTG CTGGGTATGG GGCTTCGTCG TCGCGCTCCT 
GGCTGTGGCG GCGGCGGCGG ATGGGGAGGA GGAGGAGGGG AAGTGGGAGC 
CGCTGATTCG GATGCCGACG GAGGAAGGGG ACGACGCTGA GGCTGCTGCT 
CCCGCTCCTG CTCCTGCGGC GGCGGATTAC GGGGGGACGA GGTGGGCGGT 
GCTCGTCGCC GGCTCCTCCG GCTACGGGAA CTACCGGCAC CAGGCCGATG 
TGTGCCATGC GTACCAGATT CTGCAGAAGG GAGGAGTGAA GGAGGAGAAC 
ATTGTGGTGT TTATGTATGA TGACATTGCC CATAACATTC TCAATCCAAG 
GCCTGGGACC ATCATCAACC ATCCTAAAGG TGGAGATGTT TATGCTGGTG 
TTCCAAAGGA CTACACTGGT CACCAGGTCA CCACTGAGAA CTTCTTTGCT 
GTTCTCTTGG GCAATAAAAC CGCAGTTACT GGAGGGAGTG GGAAGGTTAT 
AGACAGCAAA CCAGAGGATC ACATCTTCAT CTATTACTCA GATCATGGGG 
GTCCTGGAGT TCTTGGTATG CCTAACCTGC CGTATCTTTA TGCTGGTGAT 
TTTATTAAAG TGTTACAAAA GAAACATGCT TCCAACAGCT ACTCGAAAAT 
GGTTATATAT GTCGAAGCAT GTGAAAGTGG CAGTATCTTC GAGGGCTTAA 
TGCCAGAAAA TCTTAATATT TATGTCACAA CAGCATCCAA TGCAGTTGAG 
AATAGTTGGG GAACATACTG CCCTGGGGGG GAACCATCAC CTCCTCCTGA 
ATATATTACA TGTCTAGGTG ACATGTACAG TGTTGCTTGG ATGGAGGACA 
GTGAGACTCA TAATCTAAAG AAGGAAACTA TCGAGGATCA GTATGAGCTG 
GTTAAAAAAA GAACATCAAA TGCAAATAAG TTAAATGAGG GCTCTCATGT 
CATGGAATAT GGTGGCAAGA CATTCAAGGA TGAGAAGCTC TTCCTCTATC 
AAGGTTTTAA TCCTGCAAAT GGCAACATCA CAAATGAATT GATTTGGCCA 
GTACCAAAGG CTACAGTCAA TCAAAGAGAT GCCGATCTTC TTTTCATGTG 
GAAGAGGTAT GAGCAGTTGA ATGGGGTGTC TGAAGACAAG CTGAGGGCTC 
TTAGGGAGAT AGAAGACACC ATAGCACACA GGAAGCATCT TGACAGCAGT 
ATCGATTTCA TCGGGAAGCT TGTGTTTGGT TTTGAAAATG GGCCTTTAGC 
CCTTGAGGCT GCAAGAAGCT CTGGTCAACC ATTAGTCGAC AACTGGGATT 
GTTTGAAGAA GATGGTGCGA ATTTTTGAAT CTCAATGTGG ATCACTCACT 
CAGTATGGCA TGAAATACAT GAGAGCATTT GCAAACATAT GCAACAACGG 
TGTCTCTGAG GCCAAAATGA TGGAAGCAAG TATCAACGCT TGCGGCCGTT 
ACAACTCGGC GAGATGGAGC CCAATGACTG AAGGAGGACA CAGTGCTTGA 
TCCCCGGCTA TATACAGGTA AAATTGAATA CCAAAGGCCC CGGAGGTTTG 
CAGACCTCAT TTGTGTGAAC TTCTGTATAT ACCATGGAGA CAACAATATA 
GCTAGCGACC CAACAATATG GCCCCTTGTG TGATGGCTAA TCAGTAGGTG 
TCATATGCTT GTTGTACCCA ACAATATGGC TTGTGTGTGA TGTGGCCCTC 
TGTAAATTAC TCGATTAGCA ATCGATCCAA GAATGATTAT GACCAAATAT 
GTGCATGATG TTGTCTTCAG ACTTGATAAT AAACAAGTAG GCCAATTATT 
AGTGGACG

Gene models with high sequence identity

AT1G62710.1 [+] show detail - beta vacuolar processing enzyme
E-value: 1e-176; Score: 616.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	VACUOLAR PROCESSING ENZYME-RELATED	0
HMMPanther	Peptidase C13, legumain	0
HMMPfam	Peptidase C13, legumain	1.6e-112
FPrintScan	Peptidase C13, legumain	3.2e-56
FPrintScan	Peptidase C13, legumain	3.2e-56
FPrintScan	Peptidase C13, legumain	3.2e-56
FPrintScan	Peptidase C13, legumain	3.2e-56
FPrintScan	Peptidase C13, legumain	3.2e-56

See the detailed result >

AT1G62710.1

Model type: Protein coding
Short Description: beta vacuolar processing enzyme
Curator Summary: Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteases that is expressed specifically in seeds and is essential for the proper processing of storage proteins.
Computational Description: beta vacuolar processing enzyme (BETA-VPE); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress, vacuolar protein processing; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: gamma vacuolar processing enzyme (TAIR:AT4G32940.1); Has 785 Blast hits to 783 proteins in 241 species: Archae - 4; Bacteria - 10; Metazoa - 274; Fungi - 115; Plants - 253; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink).
Link: InterPro Scan - TAIR