K14306

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K14306

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K14306

Determination of introduced cDNA(s)

  • J013139L19 - Rice Full-length cDNAs - Original: J013139L19

    full reading [+] show sequence

    Nucleotide sequence: J013139L19 - full reading 
    TACTTTCCTT CTACTCACAC GCACACAGTC CTCAGTATCA CACACACACT 
    CACGCTCACG CTCCACTACA ACGCACTGTA CACAGTTGAT TATTAGCTAG 
    TTGGGTTTCT GGCCCGGCCG CCGGCGAGAT GGGCAAGGAC AAGCACCACC 
    GCGACTGGAT CCTCCGGCGG TGCTGCGGCT CCATCGCCGC CTGCATCCTC 
    ACGCTCGCCG TCCTCGTCGG CTTCATCGTG CTCGTCATCT ACCTCGCGAT 
    TCACCCCTCC AAGCCTTCTT TCTACCTCCA GGACGTCCAG CTCCGCAACA 
    TCGACCTCTC CGACCCTGCC ATCTCCCTCA ACCTCCAGGT GACGATCGCG 
    TCGAGGAACC CGAACGACAG GGTGGGGGTG TACTACAAGA CGCTGCACGT 
    GTTCACGACG TACAGGGAGG AGCCGATCAC GGTGCCGGTG GAGCTGCCGG 
    CGATCTACCA GGGGCACAAG GACGTGTCGG TGTGGTCGCC GGTGATGTCC 
    GGCGAGTCGG TGCCCGTGGG GCAGTACGTG GCGGACGCCA TGAGGCAGGA 
    CATCGCGGCG GGCTACGTGC TGCTGCACGT CAAGGTGGAC GGCCGCGTCA 
    AGTGGAAGGT CGGCAGCTGG GTCTCCGGCG GCTACCACCT CTTCGTCACG 
    TGCCCGGCCC TGCTCGCCGC CAGCGGCGGC AACGTCGGCG GCGCCTTCGC 
    CATGAGCGCC ACGGCGGGCG GCGGCGCCGG CGGCAACGCC ACCGTCTCGC 
    TCAAGTTCGC GCAGGCGGCG GACTGCACCG TCGACGTGTG ACGCGAAATC 
    ACCGTGCAAC CCCCAGTGAG CGTGTACGCT AGCTTGTCGC GGGAGAACGC 
    ACGCACGGCG GCGCCATGAG AGCTACAGAC GCAACGGCAA CGGCGCACCT 
    CGCCGAAGTA ATTAGTATCG GATTAGCAAT TGTAACAGTG TAAGCTTATC 
    GAGTCAGCGC GTCTTCCCCC CCTCCCCCAA TTCTGAATCT GTGCAGAATA 
    AAAGGCCACT TTTATATGTA TACATCCGCT TAGTATCATT TGTCATTGTC 
    GAAGC

    Gene models with high sequence identity

    1. AT5G22200.1 [+] show detail - Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
      E-value: 4e-45; Score: 179.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G22200.1

    Model type
    Protein coding
    Short Description
    Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
    Computational Description
    Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT3G44220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR