K14320

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased size (PATO:0000586) (Seed::Shape::large) increased length (PATO:0000573) (Seed::Shape::long) decreased width (PATO:0000599) (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K14320

Determination of introduced cDNA(s)

J033092C19 - Rice Full-length cDNAs - Original: J033092C19

full reading [+] show sequence

GATGTAACTC AGAGTTATGC GTCAGGAGCA GGGATTAATC GCCTACAGTA 
GTTATTAATC TTGTTGTTTT GTTCTTCAGA AATCAGGAGG AGAAGCCATG 
ATGCAGAAAT ATCTGTGGAT ACAGATTTTT GTGTTGCTCT CGAGCTTCTC 
CTTCTCGGTT GAGACGGATT ACGCCTCCAT TTTTAGCTTC GGAGATTCCT 
TCTCCGACAC CGGCAACATC GTCCTCATCT ACGGTCCGGC GAGAACCGAC 
CTCGTGATGA CCAAACCGCC GTACGGAATG ACATTCTTTG ACCATCCCAG 
CGGCCGCCTC TCCGATGGAA GATTGATCAT CGATTTCATC GCCGAAGCGC 
TGGGGCTCCC TCTGCTTCCG CCGTCGTTCG CGGCGAACCG GAGCTTCGAG 
CATGGCGCCA ACTTCGCGAC GGCCGGCGGC ACGGCGCTGG ACCGCGCGTT 
CTTCGTGGCC AACAACTTCA CGGTGATGTC CCCGTTCAAC ATCTCGCTCG 
GCGACCAGCT CGGGTGGCTC GACGGCATGA AACCGTCGCT CTGCGGCTGC 
AAGCCAGGTG GGTGCGAGGG TTACTTCTCC GAGTCCCTGT TCTTCGTCGG 
CGAGCTCGGA TGGAACGACT ACTCCGCCGT GCTGCTCGCC GGCAGGGGCG 
TCGACGAGGC GAGGTCTCTC ACACCCCGAG TCGTCGGAAC CATCCGCGCG 
GCCACACAGA AACTCATCGA CGGCGGCGCG AGGACGGTGT TCGTGTCGGG 
AATCACGCCG ATGGGGTGCT CGTCAGCGAA CCTCGTGCTG TTCGCGGGCT 
CAAGCGAAGC GGACTACGAG CCGGACACCG GCTGCCTGAG GAGCCTGAAC 
CTGCTGTCCA TGGAGCACAA CCGGCAGCTA CGCCACGCCC TGGCGCAGCT 
CGGCGGCGCG AGGATCATCT ACGGCGACTT CTACACCCCC CTCGTCGAGC 
TCGCCGCGAC GCCGCGCCGC TTCGGTGAGC CGCGCCATAG CTCAGACCTC 
AGAGCTAATT AAGCTTCTGG ATTTTCATGT CACCGGAACA TATATATGGC 
GGCGCAGGGA TCGACGGGGA GGAGGGCGCG CTGAGAGCTT GCTGCGGCAG 
CGGCGGTGGG CGGTACAACT TCGAGTTCAA CATGAGCGCG CAGTGCGGCA 
TGGCGGGGGT GACCGTGTGC GGCGACCCGT CGGTGTACGT GAACTGGGAC 
GGCGTGCACC TCACCGAGGC GGCGTACCAC CACGTCGCCG ATGGGTGGCT 
AAGGGGGCCG TACGCGAACC CGCCCCTACT CAGCTCGTCG TGTTCGGCGC 
GAGCGCGGTA GCCGCGGCGA GTTGAGGCCT TCTCCCTTCT TCGGCGTGGG 
CCTTCTCGTG GTCGTCTCTT TACATGTTGG TAGTAGGAAT AAGTTCACTC 
CAGGTCCCTC AATTTGTCGC CCAGTCTGAT TTTCATCCTC AGTGCAGAAA 
ACCGGATACA ACACATCCCT TAACTTATAA AACTGTACAG AAGAGGTCCC 
TCGACAGTAT TGTGGCCGGT TTTGGATGAT GTTGCATATA CGTGGCTCCC 
TTTGACTAGG TCCTCATCCC ACGTGGCATT GACGTGGCGT TTTGATCCGA 
AAAGAAATAA AGGAGTAAAA TTG

Gene models with high sequence identity

AT2G27360.1 [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
E-value: 1e-73; Score: 80.50

InterPro Scan Digest

Program	Description	E-value
HMMPanther	LATERAL SIGNALING TARGET PROTEIN 2	0.000026
HMMPanther	ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN	0.000026
HMMPfam	Lipase, GDSL	0.00000000000021

See the detailed result >

AT2G27360.1

Model type: Protein coding
Short Description: GDSL-like Lipase/Acylhydrolase superfamily protein
Computational Description: GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28610.2); Has 3560 Blast hits to 3506 proteins in 242 species: Archae - 0; Bacteria - 391; Metazoa - 0; Fungi - 2; Plants - 3156; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link: InterPro Scan - TAIR