K14351

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K14351

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K14351

Determination of introduced cDNA(s)

J033044E21 - Rice Full-length cDNAs - Original: J033044E21

full reading [+] show sequence

GTGCGGCGGC CAGGGCCCTC CTGCCCGTCG GCGGCGCCGC CGCCGTCGCC 
GTTCCTCGAC GGCTGCGCTC CGGGGAAGCC TCGTCGACGT CGCTCAGCGG 
CCCCGTATCG GATGGCGCCC GCCTCGTCCG CCGGATGCAG CTCCGCCCTG 
CTCCCCTCCT CGGTTCGTCA ACTTGCGCGC TGCCTTCCCT GCGGGGTAAG 
CGGCTCATCC GCACCCCGGC TGCTTCCTCC TCCTCCTCCT CGTTGGACTC 
CACCGGGGAA GCAAAGCCTG TGGGATTTGC AGAGAGATAC CCTGCTCTTG 
TCACCGGTTT CTTTTTCTTC ATGTGGTATG CTTACTCACC TGAGCGCACT 
TTAGAATTTA CAATTGCAGG TATTTTCTGA ACGTGATATT TAACATCCTT 
AACAAGAAGA TCTTCGACTA CTTCCCCTAT CCATACCGAT CAACTCAACG 
GTTCTGAAGC TACTGTTCCC AGTTGCTGTC TGCCATGCTA TTGGTCATGT 
AACAAGCACC GTGTCCTTTG CTGCTGTAGC TGTCTCATTT GCCCACACCA 
TTAAAGCTCT TGAACCATTT TTCAATGCGG CTGCTTCACA GTTTATCCTT 
GGCCAGCAAG TTCCGTTGAC GCTGTGGTTA TCTCTTGCTC CGGTTGTGAT 
AGGTGTTTCA ATGGCATCTC TCACTGAACT TTCATTCAAT TGGACTGGTT 
TCGTTAATGC CATGATTTCT AATATCTCCT TCACATTACG GAGCGTTTAT 
TCCAAGAAGG TTATGACTGA CATGGATAGC ACCAACCTGT ATGCGTACAT 
CTCAATAATT GCTCTCCTTG TCTGCATCCC TCCTGCAATT ATTATTGAAG 
GACCTCAACT AGTGCAGCAT GGATTCAAAG ATGCTATTGC TAAAGTTGGA 
TTAGCAAAGT TGGTTTCTAA TCTCCTTGTG GTGGGCTTGT TCTATCACCT 
TTATAACCAG GTTGCTACAA ACACATTAGA AAGGGTGACC CCTCTAACAC 
ATGCTGTTGG CAATGTGTTA AAACGTGTCT TCGTCATTGG CTTCTCAATC 
ATTGCATTCG GCAACAAGAT CACCACACAA ACAGGAATTG GCACTTGCAT 
TGCCATAGCT GGTGTTGCAC TCTATTCTTA TATCAAGGCT AAGATTGAAG 
AAGAGAAAAC GCAAATGAAG AGCGCATAAG GAGTTGAATC TGTGGATATA 
GTTGGGTAGC TGCTTTGATC GATCTGTATT GCCTCCGAGA AATAAAATGA 
GCTGTAAGAT TTATAACAAT CTAGGTGCCT GCTGTATCTC ATCTTGTTTG 
TTATTGTCGA TTTCGCTTTG AACAGCAAAA GCTACCGATG CATTTTTTTT 
TTTTTGTAAA TTATAACTGC TAAAAACCCG CAGAAACAAA GCCTCCATCA 
TCCCATTTTC CCCTTCCTTG GCTATTTGGA CTTTTGATGA TGCTCTTAAG 
TTTGAGCAGC TATACGT

Gene models with high sequence identity

AT5G46110.1 [+] show detail - Glucose-6-phosphate/phosphate translocator-related
E-value: 7e-123; Score: 49.30

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Protein of unknown function DUF250	7.6e-37
superfamily	Multidrug resistance efflux transporter EmrE	2.5e-06
superfamily	Multidrug resistance efflux transporter EmrE	0.0002
HMMPanther	SOLUTE CARRIER FAMILY 35	3e-73

See the detailed result >

AT5G46110.1

Model type: Protein coding
Short Description: Glucose-6-phosphate/phosphate translocator-related
Curator Summary: mutant has Altered acclimation responses; Chloroplast Triose Phosphate Translocator
Computational Description: ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2 (APE2); FUNCTIONS IN: antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 2548 Blast hits to 2546 proteins in 418 species: Archae - 2; Bacteria - 319; Metazoa - 501; Fungi - 418; Plants - 1031; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink).
Link: InterPro Scan - TAIR