K14440

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K14440

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K14440

Determination of introduced cDNA(s)

  • J023092B08 - Rice Full-length cDNAs - Original: J023092B08

    full reading [+] show sequence

    Nucleotide sequence: J023092B08 - full reading
    GAGCGACGAG CCAAACGCCG AAGCGACTCC TCGTTTCGTC TCCTCCCCAT 
    CTCTCCCCCC TTCCGCTTCC GAGCCAAGCA ACCGAGCGGA GCAGCACAAA
    CCCTCCTTCT CCGCCTCGAT TCCGCGCGCG CGTGGGTCCC CCCACCTCAC
    CGTCACCGGA GGAGCAGCAC CGGGGGGTCG CTGGCCATGT GGCCCGGCTG
    CGGCGGCCGC TTCTACTGGG CGCCCGCGCC GCCGTCGCCG TCGGCGGCGG
    GCGCGAGGGG CGTCGTGGTG GTGTTCGGGT GGGTGTGGAG CGACGAGGCG
    CAGCTGCGGC CGTTCGTCGA GCTCTACGCG TCGCTCGGGT GGCGCTGCCT
    CGTCTGCCAC CCCGACCTCG TCGCGCTGTA TCTGTCTGAG AAAGCTGCGT
    CGCTGGCATC TGGTGTTATC AGTGAATTAG TGAAGGAATT CAAAGTAAAG
    CCATTGCCAA CTGTGTTTGC TTCCTTTTCT GGTGGTTCGA AGGGATGCAT
    GTACAAGGTT ATTCAGTTAC TTGATGGAAA CTGTGAAGGA GATGCAACCA
    TGAAGGACTA TAGGTTGGTG AGAAACTGTA TCTGTGGGCA AATCTATGAC
    TCTGGCCCAG TAGATTTTTT CAGTGATGTG GGTACCCAGT TTCTCCAAAA
    TCCTATGATT GGCAACTCAT CTCGACCATC CATGTTACTT TCATGGATGA
    CAAAGGCCCT TGCATCTGGA ATGGACACAC TATTCCCAAG CAGAATTGAA
    GCTCAGCGTG CAGAGTACTG GCACACACTA TATTCATCAG CAGGGCTGGG
    TCCTGTTCTT ATGCTTTGCT CTGAAGATGA TGATCTTGCT CCATGTCATG
    TTGTCTGTGG TTTTGCCAGG CGTCTCATTG AACTGGGTAC TGATGTTAAA
    GTTATCAAGT GGAGTGATTC CCCTCATGTT GGCCATTACA TGTTGCATGA
    AGCAGAATAC AGGAGTGCTG TAAATGATAC TCTGATAAAA GCTCTTGTCA
    CCTTTTGCCA CAGAAGCCAG CTGAATGCCA CAAGTGATCA GGAATACAAG
    ATAGCACACT CCGTGTGCAG TCTGCACAAC GTGGCTGCTA ATTCAAATGA
    GAGGCTGAGA AGGGTAGCCA ACGGCCCCAG TGACCACTTC TTCTTGCCAA
    GTTCAAAGGA CCATAATGAA TCTAGGGATC CGGATTCTTT GATTGATGAA
    CAGAGGCGAC AACTATCCTA TCCACCCAGC ATGGAGCCTC AAGGAGTCCT
    TGGCCAAATT CTGTTTGATG TTTGTGTTCC GAAGAACGTT GAAGGATGGG
    ACATCAAACC AACAGTGTCC CCAAACGGAC GGCCAACATT GGCTTCTGCG
    CGGCAACTCG GCCCTTTCAA TCCCATCAAG TATTTTCGAC GCTCAAGGCT
    ATAATTTGTC TGCTGCAACT GTGAGTTTTG TGTACATAAC GGAGGCAAGA
    TGTCTAATAT GACTCTGAGC AAGCTTTCTC CTATGTAAGT TTCCTTGAGA
    TTGACTCACC TGCAATTTCT TTTTTGCACC GATGACTGTA CATATGTTGT
    GTATAGTTAT ACTAGTGGAT ATATTAGAAG GGGCCTTCTA GGTTGGGATG
    GTAAGGTGTA TACTAACAGT GTATAGGGGA AGGTGTGCAC TATTATGGCC
    CTAAATTATC TATTTTTGTG CCCCATAGTC ATATGATCTA ATCTAATTAT
    GAGAACTATT TATCTTC

    Gene models with high sequence identity

    1. AT2G15695.1 [+] show detail - Protein of unknown function DUF829, transmembrane 53
      E-value: 6e-94; Score: 342.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Protein of unknown function DUF829, transmembrane 53 4.1e-48
    HMMPanther Protein of unknown function DUF829, transmembrane 53 0.0000072
    superfamily alpha/beta-Hydrolases 0.0000000016

    See the detailed result >

    AT2G15695.1

    Model type
    Protein coding
    Short Description
    Protein of unknown function DUF829, transmembrane 53
    Computational Description
    Protein of unknown function DUF829, transmembrane 53; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF829, transmembrane 53 (InterPro:IPR008547); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF829, transmembrane 53 (TAIR:AT5G44250.1); Has 153 Blast hits to 151 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 35; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR