K14501

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K14501

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K14501

Determination of introduced cDNA(s)

J033028K22 - Rice Full-length cDNAs - Original: J033028K22

full reading [+] show sequence

GATCATCAAA CGAGACAAGA GTCACAGTTC GAGTCAGAGC TATCTAACCA 
ATCCATCCAT CGAGCAATTG TTGATCCGTC TGTGAATTGT GATGGCGGCG 
GCGGAGGGGG AGCAGGGGAA GACGGTGGTG GTGGTCGGGG TGGACGACAG 
CGAGCACAGC AACTACGCGC TGGAGTGGAC GATGCAGCAC CTGGCGAGCG 
GCATGGCGGG CAGCGGCGGC GCCGAGCTCG TCATCGTCCA CGCCAAGCCC 
TCGCCGTCCT CCGTCGTCGG CTTCGGCGCC GGCCCCGGTA CATCACCCGC 
CTCCTTGAAT TGATCTCGAT GAAATTTATT CTGAGCTGAC TCGTTGATGG 
CGTCAGGGTC TGGAGAGGTG GTGAGATACG TGGAGGCCGA CCTGCGCAAG 
ACGGCGGAGG ATGTCGTCGA GAAGGCGCGC CGCCTCTGCA TCGCCAACGC 
GGTAATCGAT CGATCAAACT CTCTCACTCT CGCAGATTCT GCAGATTTCC 
GCACAGGGTT TCTGTGGCTA AACGGGCACC TGATTATTGG CATTATTGAT 
GCATTTGGTT GCAGATGCAC GCGTTGATCG AGGTGATCGA AGGGGAGCCC 
AGGTACGTGC TGTGCAACGC GGTGGAGAAG CACAGCGCGG GGTTGCTCGT 
CGTCGGCAGC CATGGCTACG GCGCAATCAA GAGGGCCTTC CTGGGGAGCG 
TCAGCGACTA CTGCGCCCAC CACGCGCACT GCTCCGTCAT GATCGTCAAG 
CAACCCAAGG CCAAGCGCTC TCGTGCCGAG ACCGCGTGAA AAACACCAAA 
TTTCGGGTGT GAGCTGAGCC GAGCAATGTG TGTGTGGTTC GCTTGGGTAG 
CAGCAGCTTC TTGCGTTCTG TACATGGGAT GATTTGTATG TGTTAGTTTC 
ATAGGTTTTA TCAGTTTATG TATCGAAATG TTTGTGC

Gene models with high sequence identity

AT2G47710.1 [+] show detail - Adenine nucleotide alpha hydrolases-like superfamily protein
E-value: 3e-42; Score: 83.20

InterPro Scan Digest

Program	Description	E-value
Gene3D	Rossmann-like alpha/beta/alpha sandwich fold	5.2e-16
HMMPfam	UspA	1.2e-18
HMMPfam	UspA	0.0000023
superfamily	Adenine nucleotide alpha hydrolases-like	3.5e-17
FPrintScan	Universal stress protein A	0.00000000024
FPrintScan	Universal stress protein A	0.00000000024

See the detailed result >

AT2G47710.1

Model type: Protein coding
Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49050.1); Has 2830 Blast hits to 2747 proteins in 619 species: Archae - 112; Bacteria - 1833; Metazoa - 129; Fungi - 32; Plants - 667; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).
Link: InterPro Scan - TAIR