K14516

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K14516

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K14516

Determination of introduced cDNA(s)

  • J033045A20 - Rice Full-length cDNAs - Original: J033045A20

    full reading [+] show sequence

    Nucleotide sequence: J033045A20 - full reading 
    GGGCGGAGAT AAAAAGGCAC GCAGCCGCTC CAAGAAACCC TCGCCCCCAC 
    GACGCTCGCT CTCTCCTCTC TCTCCCTCTT CCGCCGCCGC GCTTGGGGAA 
    GGAAGGAGAA AGCAAGCCAT CGGCCCCCGC CTCCGCCTCC GAAGGGACAT 
    TGTTGCTAGT TGGTGATGGC TGAGCAGGCT AATCAACCGA CTGTCCTTCA 
    GAAGTTCGGT GGCCAGTTCC ACCTTGGCTC CAGCTTTTCT GAAGGTGTAC 
    GGGCTCGCAA CATCTGCCCA TCTGTCTCAT CCTATGACAG GCGCTTTACC 
    ACAAGGAGCT ACATGACCCA GGGCCTTGTC AATGGTGGCA TCAACGTCCC 
    AATGATGTCG TCCTCTCCAA TTTTTGCTAA TGCTCCAGCT GAGAAAGGTG 
    GCAAAAACTT CATGATTGAT TTCCTCATGG GTGGAGTGTC AGCCGCAGTT 
    TCAAAGACTG CTGCTGCTCC GATTGAGCGT GTGAAGCTGC TTATCCAGAA 
    CCAGGATGAA ATGATCAAGG CTGGTAGGCT CTCAGAGCCA TACAAGGGTA 
    TTGGGGACTG CTTCGGACGC ACTATCAAGG ATGAGGGTTT TGCTTCATTG 
    TGGAGAGGAA ACACTGCCAA TGTGATCCGT TACTTCCCCA CCCAGGCTTT 
    GAACTTTGCT TTCAAGGATT ACTTCAAGAG GCTGTTCAAC TTCAAGAAAG 
    ACAAGGATGG TTACTGGAAG TGGTTTGGTG GCAACCTTGC CTCTGGTGGT 
    GCTGCTGGTG CTTCATCTCT GTTTTTTGTG TACTCCCTTG ACTATGCTAG 
    GACAAGGTTG GCCAATGATG CGAAGGCTGC CAAGGGAGGA GGTGAAAGGC 
    AGTTCAATGG CCTTGTGGAT GTTTACCGCA AGACTCTCAA GTCAGATGGC 
    ATTGCTGGGT TGTACCGTGG ATTTAACATC TCATGTGTTG GAATCATTGT 
    CTACCGTGGT CTGTACTTTG GAATGTATGA TTCTCTGAAG CCAGTTGTAC 
    TCACTGGGTC TCTCCAGGAC AATTTCTTTG CAAGCTTTGC CCTTGGGTGG 
    CTGATCACCA ACGGTGCAGG TCTTGCCTCT TACCCCATTG ATACCGTCCG 
    CAGAAGGATG ATGATGACCT CTGGAGAGGC TGTCAAGTAC AAGAGCTCCA 
    TGGATGCTTT CTCCCAGATC CTGAAGAACG AGGGTGCCAA GTCACTGTTC 
    AAGGGTGCTG GTGCCAACAT CCTACGTGCC ATTGCTGGTG CTGGTGTGCT 
    CTCAGGCTAT GACCAGCTGC AGATCCTCTT CTTTGGAAAG AAGTACGGCT 
    CGGGCGGTGC CTAAACTGGC AGAAAATGAT GACGAACAAG TGTTTATTCC 
    TGGTCCTGCA CTAACGGGAT CTGGTGAATT TTGCCTTTTT AACATTGAAA 
    ACAATAATAA TTCTTGTAGG GGAGAACACT CCCCGACATT CGTTTTTTGG 
    TGGAAGCGTT TATCTCCAAA CATTGTCATA GGCGGAGGCG TTAATCGCAA 
    ACAGTTTACC ATCATAGGGT TGAGTTTGAG TTGAGTCTGG CCGGCTCTGT 
    TATGTCTGGC GATTTTCCTA CCATACATTA CCCTCGGTGA AATATCGAAA 
    GATTATTGAG TTGCTGTC

    Gene models with high sequence identity

    1. AT3G08580.2 [+] show detail - ADP/ATP carrier 1
      E-value: 4e-165; Score: 578.00

     

    InterPro Scan Digest

    Program Description E-value
    FPrintScan Mitochondrial carrier protein 2.8e-68
    FPrintScan Mitochondrial carrier protein 2.8e-68
    FPrintScan Mitochondrial carrier protein 2.8e-68
    FPrintScan Mitochondrial carrier protein 2.8e-68
    FPrintScan Mitochondrial carrier protein 2.8e-68
    FPrintScan Mitochondrial carrier protein 2.8e-68
    FPrintScan Adenine nucleotide translocator 1 2.7e-66
    FPrintScan Adenine nucleotide translocator 1 2.7e-66
    FPrintScan Adenine nucleotide translocator 1 2.7e-66
    FPrintScan Adenine nucleotide translocator 1 2.7e-66
    FPrintScan Adenine nucleotide translocator 1 2.7e-66
    FPrintScan Adenine nucleotide translocator 1 2.7e-66
    FPrintScan Adenine nucleotide translocator 1 2.7e-66
    superfamily Mitochondrial substrate carrier 8.4e-81
    ProfileScan Mitochondrial substrate/solute carrier 25.86
    ProfileScan Mitochondrial substrate/solute carrier 22.513
    ProfileScan Mitochondrial substrate/solute carrier 19.038
    HMMPanther ADP,ATP CARRIER PROTEIN 6e-189
    HMMPanther Mitochondrial substrate carrier 6e-189
    HMMPfam Mitochondrial substrate/solute carrier 1.5e-24
    HMMPfam Mitochondrial substrate/solute carrier 5.9e-21
    HMMPfam Mitochondrial substrate/solute carrier 1.1e-16

    See the detailed result >

    AT3G08580.2

    Model type
    Protein coding
    Short Description
    ADP/ATP carrier 1
    Curator Summary
    mitochondrial ADP/ATP carrier
    Computational Description
    ADP/ATP carrier 1 (AAC1); FUNCTIONS IN: binding, copper ion binding, ATP:ADP antiporter activity; INVOLVED IN: transport, purine nucleotide transport; LOCATED IN: in 10 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 19858 Blast hits to 12534 proteins in 484 species: Archae - 0; Bacteria - 0; Metazoa - 8967; Fungi - 5060; Plants - 3882; Viruses - 0; Other Eukaryotes - 1949 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR