K14626

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K14626

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K14626

Determination of introduced cDNA(s)

  • J023101O19 - Rice Full-length cDNAs - Original: J023101O19

    full reading [+] show sequence

    Nucleotide sequence: J023101O19 - full reading 
    GCGGCTCACA CATCGATCAC AGAAAGCTAA GCTAAAGTGC TAAACTAAGC 
    ACGAGAAAAT CTAATCAACC AAGCTTAGAT TAGATCATTA GCTATATATA 
    GCTAGGCGAT TTAATCATCC ACGAGCTAGC TTATTAGCTA AGCAGTAGCA 
    GCAGCAGAAG ATCGAAGATG GTGAAGGAGT TCGTGCAGGA CGAGGAGAAG 
    CAGCGGCTGC TGCTGGACGA GCACACCGAG AAGCACTTCA CCGCCGGCGA 
    GGTGGTCCAC GGAGATCGCG GACATACTGT CGCAGTATGG GCTGGGCCCA 
    GAGGAGTATG GGCCCGTTGT TAACTCCCTC CGCAGCAACC CCAAGGCCTG 
    GCTCGAATTC ATGATGAAGT TTGAGTTGGG ACTGGAGAAG CCGGAACCAA 
    GGAGGGCGCT GATGAGCGCG GGAACGATCG CGCTGGCTTA TGTGGTGGGT 
    GGGCTGGTGC CACTCCTACC CTACATGTTT GTGCCGACGG CCGACCGAGC 
    CATGGCCACC TCGGTCGTCG TCACGCTCGC CGCACTTCTC TTCTTCGGCT 
    ATGTCAAGGG CCGGTTTACT GGCAACCGGC CCTTCATCAG CGCCTTCCAG 
    ACCGCTGTTA TCGGCGCTCT CGCCTCCGCC GCCGCCTTCG GCATGGCCAA 
    GGCCGTGCAG TCCATCTAAG TACTGTAGCC GGAGCTCCGG CTGCAGGCAT 
    CCAAGTAAAT GTAATTAATT TAGCAGATCC AATAAGTATT GCAGAAATGT 
    ATGTATAAGT ATTTATGTAC GTTTGCTGCG TGCTTGTAGT GTATTAGATG 
    TTCTGGAGGT GTATCCGTAG TTAGCCCTAA GTGTACCATG TACACGAGTG 
    TAATCACTCA TTTTATATCG TCTTCTATTT TGGCTCCCTT TTTTATATTC 
    GGTTGGGATT AATTAATAAT GTATTGTCGA TTTGTAAGC

    Gene models with high sequence identity

    1. AT2G01770.1 [+] show detail - vacuolar iron transporter 1
      E-value: 8e-41; Score: 164.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G01770.1

    Model type
    Protein coding
    Short Description
    vacuolar iron transporter 1
    Curator Summary
    Encodes an iron transporter required for iron sequestration into vacuoles. Expressed in developing embryo and seed. Localized in the vacuolar membrane.
    Computational Description
    vacuolar iron transporter 1 (VIT1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); Has 1947 Blast hits to 1945 proteins in 688 species: Archae - 106; Bacteria - 1196; Metazoa - 0; Fungi - 163; Plants - 191; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR