K14726

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K14726

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)
  • decreased length (PATO:0000574)
    (Seed::Shape::short)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K14726

Determination of introduced cDNA(s)

  • J033027D16 - Rice Full-length cDNAs - Original: J033027D16

    full reading [+] show sequence

    Nucleotide sequence: J033027D16 - full reading 
    GGTAGGCTCG TCGCGGCCAC GTACGCCATC CCGAGCTCGG GGGCTACCCC 
    GGTCGGAGGC GGAGCGCTTG GGGGCCGGGG TTTAATCGTG CGGAGGACTC 
    GGTAGGGCTC GCCATACCTC GCGCCGTCCG GCGGCGCAGA GCGCGGCGTC 
    GCCGCTGGGG AGAAGGACGG ACTCAACGAG ACGAGCGAGC GACGGCCGAC 
    AGGCGAAGGC GTTCTCGCTT CTTGGCCTCT CGCCGTTGAA TTGGAGACCC 
    ACATTGGGCT TGTTTTGTGT GTTACTAGCA TCACCAAGAG TTCCCCTACT 
    ACTCCCAATT TCAAATTTTG GGGTTTTTCG AGCAAAAAAA ATGGATCCAA 
    CAGATATCCA AACCAGCTTC CAAAAATTTT GAGACCCTAA TCCCGTGTTT 
    CCGTTCTCCA CCAGTAGAGA ATACCTCCCG CTCCCAATCC ACTGCAGCCG 
    GGCAGTTTTC GCGCGCTGCC GAGGTGCTTG GTTCCCCCAT CTCCATTGAT 
    TCCCCATCTC GTGCGATTGG CGGAGCTGAT GAGTGACGAC AGCCACGGGC 
    GAGCGGGAGG TGGCACGTCG ACAGGCGGCG GAGGGCCGCC AGCGCAGCTG 
    CGGCAGCCGG CAAGGGCGGC TGGGTGGGCT GCAGGCTGTG GCTGCAGTTG 
    GGCAGCGCGG CAGTAGCAGG TGGCGGGCCA ACAAGTAGCA GGGCAGGCCG 
    GCAGCAGCAG CAGATCAACA GGATGATTCA ATCTTTGCTA TTTGCCTTAT 
    CCACCTTAAA GATAGCCTAT TAATCGATCC ATCTTTGCTA GGAGTATCTG 
    TTTTGCAGAT TATTTATATG TCTATCCTCC TTTGGCTATC CCATGTACTG 
    CTGAAACTTC ATTACTTGAG GTTATATTCA TGTGCATCCT CGTGCACTCC 
    TGTGTCCATC TTATATGGTA CCAACAAGAA GTTGAAGTGT TTGGGTGATC 
    GCTTTGGGGA AATGGAAGGC AGCAACCCAC CTGGTAATAT GACACAGGGA 
    CCTTCCTATG GGAGTTTAGA TTTGCATGGT ATCTCCAAGC AAATGCATCC 
    TCCAAACTCA GGAAATCAGG GCTTCAACCA GCCTCAGATA CCAGGGAATT 
    TTACCATTCC TATGGATAGG GTTACAGAGC CTGATAACAT CTCTGATGGA 
    GTTCAGTTAG GACAACATGG GAAGATTGCC CATCATCACC ATCACCACAG 
    ACACCACTCA AAGAACCATG GGAGTGATGA AGAGGAGCAC GATATGAATG 
    AGGATGCTGC TGATGGCAAA GACAAGAAGG GCTCTCCATG GCATCGGATG 
    AAGTGGACAG ATTCAATGGT GAAGCTTTTG ATTACTGCAG TATCCTACAC 
    AGGGGAGGAT CCTGGAGCTG ATTTAGGCGG TGGGAGGAGG AACTATTCAA 
    TGATGCAAAA GAAGGGAAAA TGGAAAGCAA TATCAAAGGT CATGGGCGAG 
    AGAGGTTGCC ATGTGTCGCC ACAGCAGTGT GAGGATAAGT TCAATGACCT 
    TAATAAGAGA TACAAAAGAC TAACAGATAT CCTTGGAAGG GGTACTGCTT 
    GTAATGTTGT GGAGAATCAC TCACTTCTTG ATCACATGGA TATTTCTGAG 
    AAGATGAAAG AGGATGCAAG GAAGATACTG AACTCCAAAC ACTTGTTCTA 
    TGAAGAGATG TGTTCCTACC ATAATAATAA CCGTATAAGT CTGCCTGAAG 
    ATCCCGCACT TCAGCAGTCA CTACAGCTTG CTCTTAGATG TAAAGAGGAT 
    AATGATTTCA TGAGGCATGC AAGTGGAGAT GCTGAACTAG ATGATGATCA 
    GAGTGAAGAT TCAGATTATG AGGAGAATGA GGAAGAACAT CGAGCAGTTG 
    ATACCAATAT AAGGGGCCCC TCAATGCATA AAAGGATGTG GCATGTTGTA 
    GATCATGGTG ATGTAGGTTT TGTCACCTCA TGCTCGAATG ATGGTAGTGG 
    GAGGTCTGAT CCCTATGACG TGTTGGATAT CAACAAACCC TTTCCAGATG 
    GATGTGATTT GGCTTTGGTG CAAAAAGACT TGGCTCTGAA AGCAGCAGAG 
    ATTCAAAAAC ATCGTTTGCA GATTGAAACC AAGGCTGTGC AACTCGCAAA 
    GCAACGTCTC AAGTGGGAGA TGTTCAGGAA GAACAAGGAC TTGGAATTGG 
    AAAAGTTGGC GTTGGAGAAT GAACAAATGA TGCTTCAGAA TAAGCGGTTT 
    GAGCTTGACC TAAGACACAA GGAGCTAGAA CTTGAGATTA AGATAAAGGG 
    CAATGCTAAT CATCCATGAT CTTTGTTCTG TTAGCACTTC ATTTCGCAAT 
    ATGGTTGCAG ATCAATTCAA TTCAGGACCG TGTTTATGCA AGATGGTAGA 
    GGTGGCAGAT TGTTTATGCA AGATGGTAGA GGTGGCAGAT TATCTGTGAC 
    TACTGACAAG TGACAACAAT TTCAATGCTT TATAGCTAGC TCAGTGATCC 
    TCTCCTCTTG TTGTTTATAT ATCATTATAT CTCCTGATTC TCTCTACTTG 
    TAAAATTTCC ATGTGATACT GGGCTCCATC TGTATTCTAA AGTTTTCATC 
    ATTTTTTTCT ATCCAACTTT GTTTTACTCA ATC

    Gene models with high sequence identity

    1. AT1G21200.1 [+] show detail - sequence-specific DNA binding transcription factors
      E-value: 1e-81; Score: 301.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G21200.1

    Model type
    Protein coding
    Short Description
    sequence-specific DNA binding transcription factors
    Computational Description
    sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76870.1); Has 317 Blast hits to 297 proteins in 56 species: Archae - 2; Bacteria - 28; Metazoa - 67; Fungi - 2; Plants - 135; Viruses - 9; Other Eukaryotes - 74 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR