K14826

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K14826

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: K14826

Determination of introduced cDNA(s)

  • J023047K04 - Rice Full-length cDNAs - Original: J023047K04

    full reading [+] show sequence

    Nucleotide sequence: J023047K04 - full reading 
    GGAGGGATGT CATCGAGGAG GCGGTGGTGG TCGCCGGAGC GCCGAACCTG 
    TCTGACTATT TCCCGGTGAT CGCTGCCGCC GACGTCATGG GCGTGCGGCG 
    AAGGATGGAT AATCTCGTCG GATGGGTGTA CGGCATCATC GATGTGCAGA 
    TCGACCGGCG GCGGCGCCGC CGCATCGTCT GCGAGCCTCG CAAGAATGAC 
    TTGCTGGATG TGGCGTTTGA CATGGAAGGA GAAGTGGAAA GCGAAGGATG 
    GGTGATGAAC CAAGACACCA TGAGGGGAAT GTTCATGGAT TTGCTCGTCG 
    CTGGAAGCGG CTCAACCTCA AGTACAATAG AGTGGGCAAT GGCAGAGTTA 
    CTGCAAAATC CAAAGTCCAT GATACAACTT CCAGAGGAGC TCAAAGGCCT 
    TATGGGCACA AAAACTCACG TTGCAGAATC AGACATCAGC CAGCTTCCTT 
    ATCTCCAAGC TGTCATCAAA GAGACCCTCC GGCTTCACCC AACTGTTCCA 
    ATAGCATTCA ACAAGGCTGA GGCCACAGTA GAAATCCAGG GCTACAAGAT 
    ACCTCAGGGA ACAACTGTAT ATGTGAATAT ATGGGCAATT TGTAGGAGAG 
    CTAAGATTTG GGATGATCTG GACAAGTTCA TGCCATACAG GTTCTTGGGT 
    AGAGATATAA ATTTTCTAGG AACCAATTTT GAGTTCATAC CGTTTGGTGC 
    TGGACGACGC ATCTGCCTTG GGATGCCATT AGCAGAAGGG ATGCTGCATG 
    CCTGCATCTG ATGCTTGCAT CACTACTGCA TCGGTTTGAG TGGACGATCC 
    CTGATGAAGT TAAGGGTGAT GACTTGGACA TGGCAGAAGA GTTTGGTCTT 
    GTGTTGTCCA TGGCTAAGCC ACTTCGTGCT GTGGCCAAGG AAACATGAAT 
    GCTAATGCAA AATGTTCGAT AATGTTATGT AAGACGCCAT TGCGCTTTTA 
    TTTAGGTCTC CCTGCAAATG ATAGAGATTT GTATGAATTT TTGAATTGAA 
    ATAGTTCTTG TGTAGGCCTT ATACTGCCTG TTTGGCAAGA GATGGAAAGC 
    GGATTGGAAG TTTAGAGGAC GACTGATCAT GGGAGTTTCA TTTTTATTCC 
    TATTCCTTTG TTTGATAGTA GAGATGAGAA TCATGGGAAG TATGGATGTG 
    AATTGAATTT TAAGTGATAA TGTATGGCTC ATATTTATC

    Gene models with high sequence identity

    1. AT2G45570.1 [+] show detail - cytochrome P450, family 76, subfamily C, polypeptide 2
      E-value: 2e-57; Score: 50.80

     

    InterPro Scan Digest

    Program Description E-value
    PatternScan Cytochrome P450, conserved site 0
    FPrintScan Cytochrome P450, E-class, group I 8.80000265836278e-25
    FPrintScan Cytochrome P450, E-class, group I 8.80000265836278e-25
    FPrintScan Cytochrome P450, E-class, group I 8.80000265836278e-25
    FPrintScan Cytochrome P450, E-class, group I 8.80000265836278e-25
    FPrintScan Cytochrome P450, E-class, group I 8.80000265836278e-25
    FPrintScan Cytochrome P450, E-class, group I 8.80000265836278e-25
    HMMPfam Cytochrome P450 5.30000000000001e-53
    FPrintScan Cytochrome P450, C-terminal 5.79999653854781e-14
    FPrintScan Cytochrome P450, C-terminal 5.79999653854781e-14
    FPrintScan Cytochrome P450, C-terminal 5.79999653854781e-14
    FPrintScan Cytochrome P450, C-terminal 5.79999653854781e-14
    Gene3D Cytochrome P450 7.30000590915171e-60
    superfamily Cytochrome P450 3.6e-64
    HMMPanther PTHR19383:SF45 2.89997807422873e-109
    HMMPanther Cytochrome P450 2.89997807422873e-109

    See the detailed result >

    AT2G45570.1

    Model type
    Protein coding
    Short Description
    cytochrome P450, family 76, subfamily C, polypeptide 2
    Curator Summary
    member of CYP76C
    Computational Description
    "cytochrome P450, family 76, subfamily C, polypeptide 2" (CYP76C2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 34313 Blast hits to 34043 proteins in 1718 species: Archae - 48; Bacteria - 4021; Metazoa - 12101; Fungi - 7308; Plants - 9587; Viruses - 3; Other Eukaryotes - 1245 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR