K14838

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K14838

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)
  • decreased length (PATO:0000574)
    (Seed::Shape::short)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K14838

Determination of introduced cDNA(s)

  • J033109K07 - Rice Full-length cDNAs - Original: J033109K07

    full reading [+] show sequence

    Nucleotide sequence: J033109K07 - full reading
    GCTTGTTCCT TCATGGACCT GCAGTTCCCC AATGGACAAC TAACATATGT 
    TGCTGGCGAG GGGATTACAG CAAGTGGTTT TCTTCCATTA TTTGGTGGGT
    TGCTTCAAGC TCATGGGAAA TACCCTGGAG AAACTAGAGT CAGCTTCTCT
    TGCAAGAATA AGCAAGGCAC CAGGTTCACT CCTATGTTTC AATGGCCTGA
    CAAGTCTCTG TCATTTGGAG TTACTCAAGC CTTAGCATGG AAAAGATCTG
    GTCTCATGGT GAGGCCCAGT GTGCAAGTCA GTTTATGCCC TACATTTGGA
    GGAAATGATC CTGGGGTACG TGCAGAGGTT ATCCATTCAT TGAAAGAGGA
    ATTGAATGTA ATGTGCGGTT TGTCTTGCTC AAGACATCCA TCAGCCTTTA
    CTGCTCTGTC TATTGGGAGA TCCAAGTGGA ATGGTCAAAT GGGCAGTTCC
    GGAGTGGTCG TTACCTTGGA AACACCCCTT AATAACATTG GAAGGCCATC
    TTTATGCGTT CAATTGAATG GAGGTTTTGA AATTTAGCAT TCTGCGCAGT
    AAGTTGTATA TACCACTGTA CATAGCCCTA CTAATGTCCA TGTCCTATCT
    CTGTGGAGAT GGCTGTGCAA CGCCTATGAA TGGTATCTGG AAGTGGTTTC
    TGCTCGTTTT TGTTGTCAGA CTCATAGGTG ATAAGTCTCA GCTCAACAAA
    TCAACTGGTT TATTCCCCAT GCCAACAAAG GCATCCATAT ATATACCTTA
    AAGAGATGGT GATCAAGTGT GTAGGCAGTT CAAGGTTTCT TTTGAAGAAA
    TTGGAGAGAA AAGCTGCAAG ATCAGCACTT AATACTTTTT GGAAGTTGGG
    AGAAGGAAAA GGCTATGAGG TGTTTTGCGG CTGTGCAAGA AGCCAAGACG
    AATGTGGCTT TGCAAGAAGC CGAAGATGTT CACCCAGAAG CTATGTTCCT
    TTGGAGCAGG ACTGACCATA CTGGATGTTT GCTGATAGTG AATTGCTTAC
    TGGCTTTTGC TAATTGTGAT GGATAATTAT TATCCATCAC AATTGATCGT
    TAGACGATCT CATTGCTGAG ACAAGCTTTG ATGGATGAAT TGGTGTGCTT
    TTTTCCCCTG CACTCTTGTA TTCCTCATGT AAGACTCATG ATCAGTGAAG
    CTAAGAAATG TCTACTGGGA TGGGATGGAG GACCTGTCTG GTGGCATTGT
    CAAACCC

    Gene models with high sequence identity

    1. AT3G14830.2 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 2e-68; Score: 256.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G14830.2

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53450.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR