K14906

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K14906

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K14906

Determination of introduced cDNA(s)

  • J033084N08 - Rice Full-length cDNAs - Original: J033084N08

    full reading [+] show sequence

    Nucleotide sequence: J033084N08 - full reading 
    GTAAATAAAG GAAAAAAAAA ACACTCGAGA AGTTCTTCTC CTCCTCCTCT 
    TTCCCCTTCC TCTCGCCGCC CCAAATCACC CGCCCACCAA AACCCTCGCC 
    GCGGCCTCCG CCGCCGCGGG ATTCCGGCCA CCACCAGCAG CCGCCGCGGC 
    CACCGGGGCG CCCTCCTCCT CCTGCCCCCC GGCACCGGCG ACCGACCATC 
    CCCTTGCCCC CTTTCCCCGT CGGGTTGTGA GGCGAGATGA GGGAGCTGCG 
    CGTCGCCGTC CTCATCATCG CGGTCTCGCT GCCGTCCTTC TCCGCGTCCG 
    ACCGCCAAGG AGATGCCTTA TATGATATGA AACAAAAACT GAATGTTACT 
    GGCAATCAGC TTTCGGATTG GAACCAAAAT CAAGTCAACC CTTGTACATG 
    GAATTCTGTA ATTTGTGACA ATAACAACAA TGTTATTCAA GTAACATTGG 
    CTGCTCGTGG ATTTGCTGGA GTTTTGTCAC CAAGAATTGG AGAACTGAAA 
    TATTTGACTG TCCTGTCCTT GGCTGGTAAT AGGATTTCCG GTGGCATACC 
    AGAGCAATTT GGTAATCTTT CTAGTTTGAC AAGCTTAGAT TTAGAAGACA 
    ACCTTTTGGT GGGAGAAATA CCAGCTTCTC TTGGCCAGCT TTCTAAGCTC 
    CAGTTGTTGA TACTTAGTGA TAATAATTTC AATGGATCAA TTCCTGACAG 
    TCTAGCAAAA ATCTCAAGCT TGACTGACAT CCGGCTGGCG TACAATAATC 
    TGTCTGGTCA GATACCTGGT CCGTTATTCC AAGTAGCACG TTACAACTTT 
    TCTGGTAATC ACTTAAATTG TGGAACCAAC TTCCCCCACT CTTGCTCAAC 
    CAACATGTCC TACCAGAGTG GATCCCATAG CTCAAAAATT GGCATAGTAC 
    TTGGAACAGT TGGAGGAGTA ATAGGACTTC TCATTGTAGC TGCTCTCTTT 
    CTGTTCTGTA AAGGGAGGAG GAAAAGCCAT CTGCGGGAAG TTTTTGTGGA 
    TGTAGCAGGT GAGGATGATC GACGAATTGC ATTTGGCCAG CTCAAGAGAT 
    TTGCATGGCG AGAACTACAA ATCGCGACGG ATAATTTCAG TGAAAGAAAT 
    GTTCTCGGGC AGGGAGGTTT TGGTAAAGTT TACAAAGGTG TTCTTCCAGA 
    TGGTACTAAG ATTGCTGTAA AACGATTGAC TGATTATGAA AGTCCTGGTG 
    GTGAGGCCGC CTTCTTGCGT GAGGTGGAGC TGATTAGTGT TGCAGTTCAC 
    CGCAATCTTC TAAAATTGAT TGGCTTCTGC ACAACACAAA CAGAGCGCCT 
    CCTGGTATAT CCATTCATGC AGAATTTGAG TGTTGCCTAC CGATTGCGAG 
    ATTTTAAGCC TGAAGAACCT GTCTTAAACT GGCCAGAAAG AAAACGGGTG 
    GCCATTGGTA CAGCACGTGG ACTAGAATAT CTGCATGAAC ACTGCAACCC 
    AAAGATCATA CACCGTGATG TCAAAGCGGC GAATGTCTTG CTTGATGAGG 
    ACTTTGAACC TGTTGTTGGT GATTTTGGAC TAGCGAAGCT AGTGGATGTG 
    CAGAAGACAT CTGTCACTAC TCAAGTCCGT GGAACAATGG GTCACATAGC 
    ACCTGAATAT CTATCCACAG GGAAGTCATC AGAGAGAACT GATGTTTTTG 
    GCTACGGGAT CATGCTTCTT GAGCTTGTGA CTGGCCAGCG TGCCATTGAC 
    TTCTCACGCT TGGAGGAAGA GGACGATGTT CTATTGCTCG ATCATGTAAA 
    GAAGCTACAA AGAGAAGGGC AGCTAGGATC CATTGTGGAC CGCAACCTGA 
    ACCAGAATTA TGACGACGAG GAAGTTGAGA TGATGATACA GATAGCATTG 
    CTGTGCACAC AGTCATCGCC CGAGGATCGG CCATCCATGT CAGAGGTGGT 
    TCGGATGCTA GAAGGCGAGG GGCTGGCGGA GCGGTGGGAG GAGTGGCAGC 
    AGGTGGAGGT GACAAGGAGG CAGGAGTACG AGCGGATGCA GCGGCGGTTC 
    GACTGGGGAG AGGACTCTGT CTACAACCAG GAAGCAATAG AGTTGTCTGG 
    AGGTAGATGA CAAGGGCCGT GACAACAGAC ATCAAACAAA CGGCGTAAGC 
    CGAATCTGTA CTTTTTCTGT AATGGATGTA GCGTTGTTCT TTGTAGAGTA 
    GATAGAATTG TCCTGGAACA ACAGCGTAAG CGATAGCTGG TAAATGATAC 
    AATCGGATGG ATAATGATAT GATAGAAAAA TAAAGTTGTA TGTGTTTGGT 
    TGGGCATGGC TGAACCTTAG CAGTTGTGTG CTCCCCATGC ACTGTTATCA 
    AATCGGCCGA TTAGTCGTAA AGTCGGTCAA ATTAGTTGAC TAAAGAGCCA 
    TGACTCTGAC CAAATTAGTC GTAAAGTCGG TTGTAAATTA GTCGTGATTA 
    TTGTAGCAAA TCACC

    Gene models with high sequence identity

    1. AT5G10290.1 [+] show detail - leucine-rich repeat transmembrane protein kinase family protein
      E-value: 0; Score: 798.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther PROTEIN SERINE/THREONINE KINASE-LIKE PROTEIN 4.1e-288
    HMMPanther SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE 4.1e-288
    superfamily Protein kinase-like domain 8e-78
    superfamily L domain-like 3.6e-36
    ProfileScan Protein kinase, catalytic domain 35.114
    PatternScan Protein kinase, ATP binding site 0
    PatternScan Serine/threonine-protein kinase, active site 0
    Gene3D no description 5.1e-37
    Gene3D no description 2.2e-23
    Gene3D no description 4e-47
    HMMSmart Serine/threonine-protein kinase domain 5.5e-28
    HMMSmart Tyrosine-protein kinase, catalytic domain 4.6e-28
    HMMPfam Serine/threonine-protein kinase-like domain 5e-42
    HMMPfam Leucine-rich repeat-containing N-terminal domain, type 2 0.0000000016
    HMMPfam Leucine-rich repeat 0.51
    HMMPfam Leucine-rich repeat 0.85

    See the detailed result >

    AT5G10290.1

    Model type
    Protein coding
    Short Description
    leucine-rich repeat transmembrane protein kinase family protein
    Computational Description
    leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G65240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR