K14906

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K14906

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K14906

Determination of introduced cDNA(s)

  • J033084N08 - Rice Full-length cDNAs - Original: J033084N08

    full reading [+] show sequence

    Nucleotide sequence: J033084N08 - full reading
    GTAAATAAAG GAAAAAAAAA ACACTCGAGA AGTTCTTCTC CTCCTCCTCT 
    TTCCCCTTCC TCTCGCCGCC CCAAATCACC CGCCCACCAA AACCCTCGCC
    GCGGCCTCCG CCGCCGCGGG ATTCCGGCCA CCACCAGCAG CCGCCGCGGC
    CACCGGGGCG CCCTCCTCCT CCTGCCCCCC GGCACCGGCG ACCGACCATC
    CCCTTGCCCC CTTTCCCCGT CGGGTTGTGA GGCGAGATGA GGGAGCTGCG
    CGTCGCCGTC CTCATCATCG CGGTCTCGCT GCCGTCCTTC TCCGCGTCCG
    ACCGCCAAGG AGATGCCTTA TATGATATGA AACAAAAACT GAATGTTACT
    GGCAATCAGC TTTCGGATTG GAACCAAAAT CAAGTCAACC CTTGTACATG
    GAATTCTGTA ATTTGTGACA ATAACAACAA TGTTATTCAA GTAACATTGG
    CTGCTCGTGG ATTTGCTGGA GTTTTGTCAC CAAGAATTGG AGAACTGAAA
    TATTTGACTG TCCTGTCCTT GGCTGGTAAT AGGATTTCCG GTGGCATACC
    AGAGCAATTT GGTAATCTTT CTAGTTTGAC AAGCTTAGAT TTAGAAGACA
    ACCTTTTGGT GGGAGAAATA CCAGCTTCTC TTGGCCAGCT TTCTAAGCTC
    CAGTTGTTGA TACTTAGTGA TAATAATTTC AATGGATCAA TTCCTGACAG
    TCTAGCAAAA ATCTCAAGCT TGACTGACAT CCGGCTGGCG TACAATAATC
    TGTCTGGTCA GATACCTGGT CCGTTATTCC AAGTAGCACG TTACAACTTT
    TCTGGTAATC ACTTAAATTG TGGAACCAAC TTCCCCCACT CTTGCTCAAC
    CAACATGTCC TACCAGAGTG GATCCCATAG CTCAAAAATT GGCATAGTAC
    TTGGAACAGT TGGAGGAGTA ATAGGACTTC TCATTGTAGC TGCTCTCTTT
    CTGTTCTGTA AAGGGAGGAG GAAAAGCCAT CTGCGGGAAG TTTTTGTGGA
    TGTAGCAGGT GAGGATGATC GACGAATTGC ATTTGGCCAG CTCAAGAGAT
    TTGCATGGCG AGAACTACAA ATCGCGACGG ATAATTTCAG TGAAAGAAAT
    GTTCTCGGGC AGGGAGGTTT TGGTAAAGTT TACAAAGGTG TTCTTCCAGA
    TGGTACTAAG ATTGCTGTAA AACGATTGAC TGATTATGAA AGTCCTGGTG
    GTGAGGCCGC CTTCTTGCGT GAGGTGGAGC TGATTAGTGT TGCAGTTCAC
    CGCAATCTTC TAAAATTGAT TGGCTTCTGC ACAACACAAA CAGAGCGCCT
    CCTGGTATAT CCATTCATGC AGAATTTGAG TGTTGCCTAC CGATTGCGAG
    ATTTTAAGCC TGAAGAACCT GTCTTAAACT GGCCAGAAAG AAAACGGGTG
    GCCATTGGTA CAGCACGTGG ACTAGAATAT CTGCATGAAC ACTGCAACCC
    AAAGATCATA CACCGTGATG TCAAAGCGGC GAATGTCTTG CTTGATGAGG
    ACTTTGAACC TGTTGTTGGT GATTTTGGAC TAGCGAAGCT AGTGGATGTG
    CAGAAGACAT CTGTCACTAC TCAAGTCCGT GGAACAATGG GTCACATAGC
    ACCTGAATAT CTATCCACAG GGAAGTCATC AGAGAGAACT GATGTTTTTG
    GCTACGGGAT CATGCTTCTT GAGCTTGTGA CTGGCCAGCG TGCCATTGAC
    TTCTCACGCT TGGAGGAAGA GGACGATGTT CTATTGCTCG ATCATGTAAA
    GAAGCTACAA AGAGAAGGGC AGCTAGGATC CATTGTGGAC CGCAACCTGA
    ACCAGAATTA TGACGACGAG GAAGTTGAGA TGATGATACA GATAGCATTG
    CTGTGCACAC AGTCATCGCC CGAGGATCGG CCATCCATGT CAGAGGTGGT
    TCGGATGCTA GAAGGCGAGG GGCTGGCGGA GCGGTGGGAG GAGTGGCAGC
    AGGTGGAGGT GACAAGGAGG CAGGAGTACG AGCGGATGCA GCGGCGGTTC
    GACTGGGGAG AGGACTCTGT CTACAACCAG GAAGCAATAG AGTTGTCTGG
    AGGTAGATGA CAAGGGCCGT GACAACAGAC ATCAAACAAA CGGCGTAAGC
    CGAATCTGTA CTTTTTCTGT AATGGATGTA GCGTTGTTCT TTGTAGAGTA
    GATAGAATTG TCCTGGAACA ACAGCGTAAG CGATAGCTGG TAAATGATAC
    AATCGGATGG ATAATGATAT GATAGAAAAA TAAAGTTGTA TGTGTTTGGT
    TGGGCATGGC TGAACCTTAG CAGTTGTGTG CTCCCCATGC ACTGTTATCA
    AATCGGCCGA TTAGTCGTAA AGTCGGTCAA ATTAGTTGAC TAAAGAGCCA
    TGACTCTGAC CAAATTAGTC GTAAAGTCGG TTGTAAATTA GTCGTGATTA
    TTGTAGCAAA TCACC

    Gene models with high sequence identity

    1. AT5G10290.1 [+] show detail - leucine-rich repeat transmembrane protein kinase family protein
      E-value: 0; Score: 798.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther PROTEIN SERINE/THREONINE KINASE-LIKE PROTEIN 4.1e-288
    HMMPanther SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE 4.1e-288
    superfamily Protein kinase-like domain 8e-78
    superfamily L domain-like 3.6e-36
    ProfileScan Protein kinase, catalytic domain 35.114
    PatternScan Protein kinase, ATP binding site 0
    PatternScan Serine/threonine-protein kinase, active site 0
    Gene3D no description 5.1e-37
    Gene3D no description 2.2e-23
    Gene3D no description 4e-47
    HMMSmart Serine/threonine-protein kinase domain 5.5e-28
    HMMSmart Tyrosine-protein kinase, catalytic domain 4.6e-28
    HMMPfam Serine/threonine-protein kinase-like domain 5e-42
    HMMPfam Leucine-rich repeat-containing N-terminal domain, type 2 0.0000000016
    HMMPfam Leucine-rich repeat 0.51
    HMMPfam Leucine-rich repeat 0.85

    See the detailed result >

    AT5G10290.1

    Model type
    Protein coding
    Short Description
    leucine-rich repeat transmembrane protein kinase family protein
    Computational Description
    leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G65240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR