K15040

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K15040

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K15040

Determination of introduced cDNA(s)

  • J033031A17 - Rice Full-length cDNAs - Original: J033031A17

    full reading [+] show sequence

    Nucleotide sequence: J033031A17 - full reading
    GACCCACCCA CGCGCCGCGC CCTAACCCTA ACCCTAACCC TAACCCTACT 
    CCTCTCGCTC GCCATGTCCG AGCCCGCGTC GCCCCCACCG GCCATGCCCG
    AGGACGCCGC GCCGCCGCAG CCGCAGCCGG AGCCGGCGGT TCCAGCGGGG
    GAGGAGGCCG CCCCGTCTCT GGAGAGGAAG GAGGAGTTGC TGCCGGTGGA
    GGAGAAGGTC TCGGAATTAG ATGAATCACA GTCACAGCTT ATGGGGAGAC
    TTCGGGGACT CAAGGAGGAT TTGCTGAATT GGAGGAGCAG TTTAGATACA
    CAAGTGACAA AATACAAAAG CGAACTCTCT GATATCAAAA CTGCGCTGAA
    TAGCGAAATT GAACAGCTGA GATCAGATTT TCAAGAATTG AGGACCACCC
    TTAAGAAGCA GCAGGAAGAT GTATCAAATA GTTTGAAGAA TTTGGGGCTA
    CAAGATGCTA CTGACAATGA TGGGAACAAA GGAAGTGGTG AGGAGAATGC
    AAGTGAGGGT GTCTCAGATA CCCTAGGGAA CCTGAAATTG GATGATACTC
    CAAAAAACCA TGATGAAAGC AGTGATGCCA ATGATGAAAA GAATGAAACC
    ATTGCTGAAG ATGGCACGGT CGATAAAACT GTTAAGGCTG AGAGTGCAAG
    TGATGAATGA AGTAGCGGAG GAACCAGAAG TAGAACTTGG GCCGCTTCTT
    TTTCGTGGCT CAGCTGTAGT AATTTTTAGA ACAGAGATAA CTTTGGTTCC
    TGAAACGAGT CCACGCTCTC TGATGGCTTC GTCGTGTAGT GTTGTTAATC
    GCTGTCATGA CTTGTGAAAT CCCAGTTCTC TGGAATGGCC GTAGTAACAA
    TTTTATTGCT ATCAGCAAGT TATCTAAAGA ATAGCCACTG GAATTTTGCC
    TTTAAAAATT CCAGATATTT TTCTCAAATC AGTTATCTAT GTGATGCCAG
    CCATTTTAAG GCGGAAGAAT GATGGGTTTT TTTTTTTTGG TAGGCCATGG
    TTGGTATTGT TGACTGTGGC TATGGATGAA ATAGTATTCA TTTGAACGGT
    GAGTTTGAAT CAAATCAGCC AATATAAAAT TGGTTAGCTT TGT

    Gene models with high sequence identity

    1. AT4G15790.1 [+] show detail - unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: ...
      E-value: 2e-25; Score: 114.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G15790.1

    Model type
    Protein coding
    Computational Description
    unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 411 Blast hits to 380 proteins in 121 species: Archae - 4; Bacteria - 107; Metazoa - 85; Fungi - 29; Plants - 59; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR