K15113

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K15113

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K15113

Determination of introduced cDNA(s)

J013095J23 - Rice Full-length cDNAs - Original: J013095J23

full reading [+] show sequence

GCTTGGACTT CCACTGTATC GCACAAGTGG AGATGACTCT GTGCTGTTTG 
ATCATGACCT TGAGAGTTAT GCTCTCTATG ACACTAAGGG CCATCAAGTT 
CCCCAAGAGC TGGTAGAAAA GATAGGGAAG GTTTTTGAGA CTATATTGGA 
AGAGACTGGC AAACTGAGGG AAGAAACTAA GGAAGACATT TCTATTGCGA 
AGGCCATTGC AATTGTTATG GAGAGAAATC CACACTTGAG GCAAGAAGGG 
ATTGCTCATG ATGTTCTTCA GTGGTATTTG TGCCGCATGG AAGGTTGGTT 
TGCTACTGAT GCGGACGCAA TCTCTCTTCA GGGTTGGGAC CAGGAGGTAC 
TGCTTCCTGG TGGCCATGGT CTCATGGTTC GTGGATATCG TCCAGTAATA 
AATACTCTGG CAAAAGGCCT AGATATACGC CTTGGCCACA GGGTTGTTGA 
GATTGTTCGC CACAGGAATA GGGTGGAGGT TACTGTAAGC AGTGGTAAAA 
CATTTGTTGC GGATGCTGCA GTCATTGCTG TCCCCTTAGG TGTTCTTAAA 
GCAAACACCA TTAAATTTGA ACCTAGGCTG CCAGAGTGGA AGGAGGAAGC 
AATAAGAGAA CTCTCAGTTG GAGTCGAGAA CAAAATAATT CTCCACTTCA 
GCGAGGTTTT CTGGCCTAAT GTGGAGTTCC TTGGAGTAGT TTCATCCACC 
ACATATGGCT GCAGCTATTT CCTCAACCTC CACAAGGCTA CTGGCCATCC 
TGTTCTAGTT TACATGCCTG CGGGTCGGCT TGCATGTGAC ATTGAAAAGC 
TGTCAGATGA GGCTGCTGCC CAATTTGCCT TCTCTCAGCT GAAGAAGATC 
CTGCCCAACG CTGCCGAGCC GATACATTAC CTAGTGTCAC ATTGGGGCTC 
AGACGAGAAT ACACTTGGAT CCTACACCTT CGATGGGGTG GGCAAACCTC 
GTGACCTGTA TGAGAAGCTG CGGATCCCAG TCGATAACCT ATTCTTTGCT 
GGAGAAGCCA CCAGTGTCCA GTACACTGGC ACGGTGCATG GCGCCTTCTC 
CACTGGTCTG ATGGCAGCTG AGGAGTGCCG AATGAGGGTT CTTGAGCGGT 
TCAGGGAGCT GGACATGCTG GAGATGTGCC ACCCTGCAAT GGGGGAGCAG 
ACCGCCACTG TCTCAGTCCC ACTGCTCATC TCCCGGCTGT GAACAGACCA 
GGAGCTGCAC AAAAATTATA GTCTTCTAAG GCCATTTGGC ACTTGGCACC 
CGGCGAGCGC ACTAAGCCAT TCCCCTGATT GCTCGAGGAA GGCAGCATTG 
GAGCAATTAT CTTATTTGCT TCTCCTTGGC ATGAGGAGTG TGCTGGTGCA 
GCTTGCGGTG CGCTAAATAA AGTCACTGTG AAAATGGAGT GTGGGAGTCT 
GGTGTGTATT GTTGAGTATA AAATGAGGGA GTCAATATGT AGTTAAGCAG 
GGATTACGGA CAATGTGAGC CATCATTACT GAACAAGATG GTGTATGTGT 
GACGAACAAT TAATTTAAAC GATCGATATT GAAAATGAAT GAGTGCTTTG 
CCCCCAAGTT TGACC

Gene models with high sequence identity

AT2G43020.1 [+] show detail - polyamine oxidase 2
E-value: 1e-169; Score: 593.00

InterPro Scan Digest

Program	Description	E-value
superfamily	FAD-linked reductases, C-terminal domain	3e-26
superfamily	FAD/NAD(P)-binding domain	4.1e-24
HMMPfam	Amine oxidase	4.3e-67
Gene3D	no description	3.7e-41
HMMPanther	AMINE OXIDASE	5.8e-255
HMMPanther	AMINE OXIDASE	5.8e-255

See the detailed result >

AT2G43020.1

Model type: Protein coding
Short Description: polyamine oxidase 2
Computational Description: polyamine oxidase 2 (PAO2); FUNCTIONS IN: primary amine oxidase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Flavin-containing amine oxidase (InterPro:IPR001613); BEST Arabidopsis thaliana protein match is: polyamine oxidase 3 (TAIR:AT3G59050.1); Has 6381 Blast hits to 5960 proteins in 1057 species: Archae - 96; Bacteria - 2371; Metazoa - 1412; Fungi - 575; Plants - 752; Viruses - 0; Other Eukaryotes - 1175 (source: NCBI BLink).
Link: InterPro Scan - TAIR