K15120

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K15120

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: K15120

Determination of introduced cDNA(s)

  • J033114L22 - Rice Full-length cDNAs - Original: J033114L22

    full reading [+] show sequence

    Nucleotide sequence: J033114L22 - full reading 
    GTCTCGACCA CACCACGCCA CTCCTCCCCT CCTCATCGCG AGAGAGAAGA 
    GAAGAGAGGC GAGACGCGAG GCACGAGAGT GCGTGTGGGT GCGGAGTTAC 
    TCGAGGAGTG GTAGTACCAG CAGGCAGCAG CAGTAACACT GGTTGGCGGT 
    GGCCACTGGC GGCGAGCGAG GCAGTGGAGA AGAACCAAGA ACCCCGAGTT 
    CTCCCTAGGG ATCTCCCCCT TCCCTGCATT CGAGGGTGGA GTTTGTCCTA 
    CTTCAGAGGG AGTCTCAGTC GCTACGCTTG GTGCCCAATA ATTAGCCTGG 
    AAGCAGGTGA AGTGCTCTCC GCCTCTCCGT GCTGAAATCT GATTCTCTGG 
    TCTCCAGGAA TCCTGTTGGT AGGGCAGTTC AGTAGGAGAT AATTGCTTGC 
    AGATTTGCCT TGTTTGGTTG AACTGGGAAG AGGGGGTCAA TTAGTGGCTG 
    TGCACTTGTT ATGCTAAAAT TGAATGGAGA TAGTAGATAA GATCGCTGAG 
    CCCAAAGAAC CTTTGATGGT CACTGGTAGG AAGGTGCAGA GCTTGGAGGC 
    ACCAATACCG ATAAAGGCGT CATGGAAAGG GAAGAGCTCC CAGCAGCAGC 
    AGCAGCAGCA GCAGGATGAG AAGGATTTTC CAGCTGATGG TGAGGAGAGT 
    TTTCTGAGCC TGGATTCCTC AGACGAAGGT GGCCGGAGTT CTTTCTCAGG 
    GGCCAGTCAC CCCCTGGAAC CAATTGATAT GGATCTTATG AAGACGGTCT 
    ATGTCGCAAT TGATGAGGAG AAATCCGAGC AACCGGTGTG TTTAGTGCGA 
    GGAGTATCGG CGAAAGGGCC ATTCATAGAT GACCTTTCGA TCTGTGTTAC 
    AGGCATGAAG GCCAATGCAG TGGTAGGTGC AGGCAGTGCT GATGGTTTGG 
    CTGAAGAGAT GAAGGTGCCG GGTGCTGCGG TGCCATCATT GGCAACGGCG 
    CGGTCATCGC AAGCTACAGA AGCTGTGTCC TTGCCTCCAG ATTCAGAGGA 
    GAAGGACTGT GTCTGGGATG CCTCGCTTCC TCCCAGCGGC AATGTGAGCC 
    CTCACAGTAG CATTGACAGC ATGGGTGTAG TCACGGCGAT GAACACTATG 
    AGCAGCTGTA CCAGCACATA TAAAAGTGAA GCCGTATCCA GTGAACCAGT 
    GCCTACGATG GAGAGGAACT GTGGGAGTGT GAAGGGCAGC GTTAGAGGTG 
    ACTCTCTAGA AAGTGCAAAA ACCAGCATGA GTCGAGCAAG TGATAGCAGT 
    GGTGTTAGTG ATGACAGCAG CTGGAGCAAT ATCACTGGAG GTGCTAGTAA 
    GCCTCACAAG GGTAATGATC CTAGATGGAA GGCAATACAT GCTGTACGGA 
    CTCGAGATGG TGTGCTTGGA ATGAGCCATT TCAGACTGCT CAAGCGTCTA 
    GGCTGTGGTG ACATTGGCAG TGTTTATCTC TCAGAGTTGA GTGGGACAAG 
    GTGCTACTTT GCAATGAAAG TAATGGACAA GGCTTCCTTG GCAAGTAGGA 
    AGAAATTGAA CAGGGCACAG ACTGAGAGGG AGATTCTGCA GCTTCTGGAT 
    CATCCATTCC TTCCAACTCT GTACACACAT TTGAGACCGA CAGATTCTCG 
    TGTTTGGTCA TGGAATTCTG TCCAGGTGGT GATTTGCACA CGCTGCGACA 
    GAGACAGGCA GGAAAACATT TCTCCGAGTA TGCTGCAAGG TTTTATGCTG 
    CAGAAGTACT TCTAGCTCTG GAGTATCTAC ACATGTTGGG AGTTGTTTAC 
    AGGGATCTGA AGCCAGAGAA CGTTCTTGTT CGTGATGATG GTCACATAAT 
    GCTTTCAGAT TTCGACCTCT CCTTGAGATG TGCAGTCTCG CCTACACTGA 
    TCAGAGCATC AGCTTTTGAT TCTGATCCAA GAAGAGCTGG TGGTTCATTC 
    TGTGTACAAC CTGTTTGCAT GGAACCCACT TCAGTCTGCA TTCAACCCGC 
    ATGCTTCATG CCCAAATTGT TTGGTCAGAA GAGCAAGAAG AAAACTAAAA 
    AGACAAGGTC CGAGCTGGGA CCGAGTGCCA CGACCATGCC CGAACTAGTT 
    GCTGAGCCAA CATCAGCCCG ATCAATGTCG TTCGTTGGCA CCCACGAGTA 
    TTTGGCTCCA GAAATCATCA AAGGCGAAGG CCATGGAAGC GCCGTTGATT 
    GGTGGACCTT CGGTATATTC TTGCACGAGC TTCTATACGG CAAGACGCCG 
    TTCAAGGGGT CAGGCAACCG TGCTACCCTC TTCAACGTGG TCGGTCAGCA 
    GCTAAGGTTC CCAGAGTCGC CGTCGACAAG CTACGCGAGC AGAGACCTCA 
    TCAAGGGGCT CCTGGTGAAG GAACCGCAGC ACCGCCTGGG CGTGAAGAGG 
    GGCGCCACGG AGATCAAGCA GCACCCGTTC TTCGAGGGCG TGAACTGGGC 
    TCTCATCCGG TGCAGCACGC CTCCCGACGT TCCCAGGCCC GTCGAGGCCG 
    AGCTGCCCGT GAAGTACGGC GTGGCGGAGG CGATTGGGAG CAACAGCAAG 
    AGGATGGTAG GCGCGGACAT GAAGTCCGGT GGGAAATACC TTGACTTTGA 
    GTTCTTCTAG GGTTGTGCTG TACTTGCCTA GTGACAAGAG AAGCTGTTGG 
    TTGCAAAACT GCTGGGGCTG GTCAGTTTGG TGTTGTGATT CGATGTGCTT 
    GACCTGGTGG TGTTTGTCGC ACCACGGCAG CAAAATTATC GGATCTGAAA 
    TTCTGAATTG GCCAGAATTA GGTTGATATA TGTTTGCATG TTTGAATTCT 
    TCTCCCCCTG TGCTGTTTCT GTAGTGTAGT GCTATCTAAC AGTCTGGTTT 
    GAAACATGGG CTAACAATTG CGTTCCAGGA AGGCCTCAAC GATGGATATT 
    TCTGGAACTA GTAGCGTATA AGCTCAGTCT GTTTAATAGT CGCAGATCAA 
    AGTTCAATGT GCATTCTTTC TTGTGCCATT TACCGTG

    Gene models with high sequence identity

    1. AT2G44830.1 [+] show detail - Protein kinase superfamily protein
      E-value: 0; Score: 308.00

     

    InterPro Scan Digest

    Program Description E-value
    PatternScan Serine/threonine-protein kinase, active site 0
    superfamily Protein kinase-like domain 6.1e-59
    superfamily Protein kinase-like domain 2e-14
    HMMPfam Serine/threonine-protein kinase-like domain 8.5e-23
    HMMPfam Serine/threonine-protein kinase-like domain 3.2e-20
    HMMPfam Serine/threonine-protein kinase-like domain 9e-07
    ProfileScan Protein kinase, catalytic domain 33.248
    ProfileScan Protein kinase, catalytic domain 10.295
    HMMPanther NONPHOTOTROPIC HYPOCOTYL PROTEIN 1(PHOTOTROPI 1.1e-62
    HMMPanther SERINE/THREONINE PROTEIN KINASE 1.1e-62
    HMMPanther NONPHOTOTROPIC HYPOCOTYL PROTEIN 1(PHOTOTROPI 1.7e-174
    HMMPanther SERINE/THREONINE PROTEIN KINASE 1.7e-174
    HMMSmart Serine/threonine-protein kinase domain 2.9e-41
    Gene3D no description 9.5e-53
    Gene3D no description 7.3e-14

    See the detailed result >

    AT2G44830.1

    Model type
    Protein coding
    Short Description
    Protein kinase superfamily protein
    Computational Description
    Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 114332 Blast hits to 86906 proteins in 3497 species: Archae - 36; Bacteria - 13769; Metazoa - 45842; Fungi - 12821; Plants - 20261; Viruses - 350; Other Eukaryotes - 21253 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR