K15251

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased size (PATO:0000587) (Seed::Shape::small)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K15251

Determination of introduced cDNA(s)

J033050E24 - Rice Full-length cDNAs - Original: J033050E24

full reading [+] show sequence

GGCGGGGCGG GTTGGCGAAG CGGAGACGGC ACGCGCGGAG TCCGTACGGC 
CGCAGCGAGG CGACGTGGTG GCGTCGAGTC GGCGGCGATG ATAAGGGTTG 
TGTCTCCGCC GCCTCCGTCC ACCGTGCAGC TGCGCGGCGG CGGCGGCACC 
CCGGGGCCCT CCTCCTCCTC CGCGGTCTGC CGTTTCTGGG GTTCCCGAAG 
AGGAAGTAGA GTTGCGGCGG CGAGTAGTTG GGGTTGGGGG AGGAGTAGGA 
GGAGGAGGCG CGCCGCCATC TCATGCTGCT CTGCTGAGGA AGGGGAGGGG 
CCCCGGGTCG CCACGCCGTC GGCTCCGCAG GCGCCGTCCG AGGGATCGAT 
ACAGCTCTAC TCGCAGATCG AGAGGGTGAT CACGGAGGCG GCGAAGCAGT 
CCCGGGAGGG CTGGGGTTCG ACCGGAGATT GGACCGAGAT CGAGGGAGCG 
TGGGTGCTGA AGCCTAAATC ACAGGAGCCC TCGTTCGTTG TTCACTTCGT 
TGGTGGGATT TTTGTTGGAG CTGCTCCTCA GATCACTTAT CGTTTCTTCC 
TTGAACGACT TGCAGACAAG GGAGCTTTGG TGATCGCAAC GCCATATGCT 
AGCGGCTTTG ATCATTTCTT CATCGCAGAT GAAGTTCAAT TTAAGTTTGA 
CAGGTGCTTA AGAAACATGG TTGAACCTGT AAATGACCTT CCCACATTTG 
GTGTTGGGCA TTCTTTGGGA TCTGTGATCC ACCTTCTCAT TGGATCAAGA 
TACGCTGTGC AGCGAAGTGG AAATATATTG ATGGCCTTTA ACAATAAGGA 
AGCAAGCTTG GCAGTTCCAT TATTTTCGCC TGTAATTGTT CCCATGGCAC 
AGAGTTTTGG GCCAATATTT TCCCAGTTGA CATCATATCC AACACTTCGT 
TTTGGGGCGG AAGCAGCCAT TAAGCAACTT GAGAATCTTA GCCCTCCTGT 
TGTTAAGCAG CTCCTGCCAT TAGTTCAGCA ACTTCCTCCA CTGTATATGG 
ATTTAGTAAA AGGCCGAGAA GAATTCGTTC CAAAGCCAGA AGAGACACGT 
CGGCTGGTAA AATCCTACTA TGGGATTTCT CGAAACCTCT TGATAAAGTT 
CAAAGATGAT CAAATTGATG AAACATCTAT TCTTGCGCAA GTACTAAGCT 
CCGAATCTGC CATTAGCTCA CTGCTTGACA TGTCAATTCG GTCACTTCCT 
GGAGATCATG GACTACCGTT ACAGCAGGTA CTTCCTGATG TTCCACCAGC 
AATGGCCGAT GCAGTAAACA GAGGAGGTGA ACTCCTGACA AATCTAGCAA 
CAGGGACACC ATGGGAGGCT GTTGCTAAGG AGGTAGGTAG CACTTTAGGT 
GCGGATTCGG GCGTTCTACG AGCACAAATC TCAAAGGATG TCAATACACT 
TGTTGACGTA ATTGTTTCAT GGATTGAGTC AAATTCTGGT CCAAGATTAC 
TTCGTTCATG ATGACACCCC CACAAAGGTT TAGCAGGTTG GGAATGCCAG 
TACCAAACGT CAAGAGGATT CAACTGACGA GTATTGCAAA CTGTAGATTG 
CATTTCAACC CCGACATGCT AGTGGTGTAT ATATATGCTG TACATCGTAG 
CGCATGACTT GTTGAATGTA ATCTATCTTG ATGGAGTATT ATGAATGTAC 
ATTTCCATTA AAAAAATGTA CATTTGGAAG GACTAGAATA GAGCGATGAG 
TTTATGGGTT TGTGGCTGCT CTGATCCTGA CAGGCACTGG GGGTGCACAG 
TACTGCACAG TCCTGTCCGC AAATCTACAG TTCAGTTTTA CAAGAAATGT 
TCATTTGGTA GCAACGGAAG GTCTATAGTT CTCCGAGGAA ACTGGCCGAG 
GTATGCACCC GTGCTTATCA TTCTTCGTAA AACTGTAATT ATTTGTTAAA 
ACTATCCTTT TACTTCAGAT GGGTATTTCA TAAGACTGCT GCAACAACAA 
CAGCAACAAC AGTTGATTTT ATCACATATG GGCTCGACTT ACCCTGAT

Gene models with high sequence identity

AT5G47860.1 [+] show detail - Protein of unknown function (DUF1350)
E-value: 1e-134; Score: 477.00

InterPro Scan Digest

See the detailed result >

AT5G47860.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF1350)
Computational Description: Protein of unknown function (DUF1350); LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1350 (InterPro:IPR010765); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1350) (TAIR:AT3G43540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR