K15325

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K15325

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K15325

Determination of introduced cDNA(s)

  • J033115K18 - Rice Full-length cDNAs - Original: J033115K18

    full reading [+] show sequence

    Nucleotide sequence: J033115K18 - full reading 
    GTCCGTCCGT TCGATCCTTA TCAAAACAGC ATCGCGTCCT CTGCCTCCTC 
    TTCCCCACGC CGCCGGCCGC GCCGCCGCTG CCGCCGTCGC CCCGCGCCCT 
    TCTCCCTCAT CCCCGCCGCT GTGAGGTGTC AACTCCGTCG CCGCCTCCCC 
    TGTGGTAGCA CGAGGGGAAC CAGGGCTCAC ATGCTACTCG ATCGGGGCGT 
    AACTTTGGAT AGCCATGGCG GCTATGCTTC TTCGCCTTCA TCCCTGCCCT 
    CTCCTCTTTC CGCCGCCGCC ACCGCACCCA CATCTCCGCC GCCAGCTGGC 
    CGTCTATTCG ATCCCGAAAT CCTCCTTCCG ATCCGCCGCC GCCGCGGCTC 
    GAGCTAGAAA CCCTCCGCGT CTGGCCTCCG TCGGTGGAGC CGAGCGACGG 
    CGCGTGGGTG ACGATTATGA TGAAGAGGAA GAGGACTTGG GACAGGCTCT 
    CGAGAGAACG CGGCAACTTG TCGAGTGCGC GATGTTCGCA TCCGTCGCTG 
    GCCTCGCGTA CTTCCTCAGC AACTCCCTCG CCATCGAGAA TTACTTTAGC 
    TGCTTTTTTC CATTGCCGAT TGTTATCTCC TCCTTAAGAT GGGGACTAGA 
    AGCTGGCAGG AAAACTGCGG TGGCTACTGT TTTACTGCTA TTCACATTGT 
    CTGGCCCTGT AAAAGCATCA ACTTATCTGC TCATGCATGG AGTAGTAGGT 
    CTGGCCATGG GTACTATGTG GAGGTTGGAG ACCAACTGGA TTGTTTCCAT 
    CATACTCTGC TCAATTACCC GGGCTCTAGG GGCTTGTGGA TACGTTTTAT 
    TGTCGTCATT TCTGATAAGA GAGAATATTC TTGGATTGAT AACAGTCAAT 
    ATACATGCTT CCCTGACATA CATTCTGGCG GCAGCTGGGG TGAACACGAT 
    TCCTTCCATG GATGCAATTT ATGTACTCTT TGGAACGCTG CTTCTACTCA 
    ACTGTGGATT CTTTATCTTC CTACTACATA TAATGTATAC AATATTCCTG 
    ACTAAGCTCG GAATAAAGCC TTCATTGAGA CCTCCAAGAT GGCTGGACAA 
    AGCAATTTGA GTTTACAGGT AGAGTGGCAA CTTACTCCTT TGTACCTTGT 
    GCGCTGACTG AAACCGGAGC ATTCAGTGTC ACAATGCTTC CTAATGTAGA 
    TTCCGCAGAG TGTCAGCGCT GAATTCGTCC CCTGCAAAAT GATAATTAGT 
    GTCCTTTTTC TTTGGCCATG GTACATCCTA GATCTGTAGG TCTTCTTTTC 
    TAACGAAGAT CAAGCTAAAA GTTAGGATAC GTAAAGCAAG AAAGATCACT 
    GTTACTACAT GATTAATTGA GTTTAATTTT TACGAACTTG

    Gene models with high sequence identity

    1. AT1G26180.1 [+] show detail - unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2232, membrane (Inter...
      E-value: 4e-72; Score: 269.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G26180.1

    Model type
    Protein coding
    Computational Description
    unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2232, membrane (InterPro:IPR018710); Has 285 Blast hits to 285 proteins in 90 species: Archae - 0; Bacteria - 140; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR