K15414

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K15414

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • low brightness (PATO:0000327)
    (Seed::Color::dark)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K15414

Determination of introduced cDNA(s)

  • J013114I22 - Rice Full-length cDNAs - Original: J013114I22

    full reading [+] show sequence

    Nucleotide sequence: J013114I22 - full reading 
    GCTACTAGAC TAGAGCGAGC AGAGCAGCCG GCGATGCGGC GGCGCCACCG 
    CGAGCAGCTG CCTCCCGGGG CCGACCGCGA ACGCCTCCTC GCCGAGGAGG 
    TCCTCTACCT CCACTCCCTC TGGCGCCGCG CCGCCCCCGC TCCCATCCCT 
    CCTCGTGGCT CCGGTTCCGT CGCCGCCCTC CGCCGCGTCG ACCGCCGGAG 
    GCGCAGGAGG CTCGAGCGCC GCGCCCAGGA GCAGCAGCGG GAGGAATCCG 
    GCCCGGAGTG GCCCCTCGCG CCGTCTCCGC CCGCCTCCCC GACAACCTGG 
    CACGACAACA AGGCCGCCTC CTCCCCCGCG CAGCGCCCGC CGCAGCAGAA 
    GCAGCCTTCG CCTGGATCGC TCTCGCAGCG AGCCGCGCTC CGCGCCGCCG 
    AGGAGTTCTT CTCCAACCGC GGGTCGGACG ACGACGACGA GGTGGTGGAG 
    GAGGAAGGGT CTGAATCGGA GGGCGAGGAG GCGGCGGGGT TCTTCATGGG 
    GCTGTTCGAG CGGGACGCGG CGCTGCGGGG GCACTACGAG CGGGGGTGGG 
    AGGGAGGGGA GTTCGTGTGC ATGGCGTGCG TGGGGAGGAA GGGGAAGGCC 
    AGGAGGTTCG CCGGCTGCGT CGGCCTCGTC CAGCACGCCC GCGCCGCCAC 
    CCGCTGCGGG AGGCCCCGGG CGCACCGCGC CTTCGCCGCC GCCATCTGCC 
    GCGTGCTCGG CTGGGACATC GACAGGATGC CCAGCGTCGT CATCGACCCC 
    CGCGGCACGC TCGGCCAGGC ACTCGCCGCC GCCGAGGCCG CTGCCGCCGT 
    CGCTGCCCAA GAGAACAATG TTGATGCTGT TGAGAAGACG ATCTCTTCTG 
    AAGATCAGGT TGCAGAGAAG GAAGATGTTG AGACTGGAAA AAATGACGGA 
    TCTTTGAGTG ATGTGGATGC GATGAAGGAA AATTCCAATG TGGGGAAGAA 
    CAGCTCTTCA ATTAATGACA ATAATGGAGA TGTTCATGAG AAAGGGAATG 
    GTGGAGCTTA TGAAAAGGAC ATAATCTGCT GCATACACGT GAACTGAAGA 
    AAAAGGCTTC TGTACTATCC AAGCAGGCAT GCTCATCACA GTCTGGTATG 
    TAGCAGAGCT TCAGTGTTTG TAGGATAATT CCACTAATAA GTGTAATTGA 
    GGGCAAGCGT ATAAGTACAA TAAATCATTA TCTTGAATTC TGGGCTCTAC 
    CTAAGATTAT CTGATCTACA CTATTGCAGT TTATATAAAC TGCTGTTCTT 
    TGATTACCTG ATTGAGCATT AGCTCATTCT CCCACCTGAG CACTAGATAT 
    CATATTAGAG AGAGGTCTCT ACCTCTGTGA CCAGTTGTAT TCATTTGTAA 
    TTGCTTGAAA CGAAGGTCCA GCTAGTTGGG TGTTGCCCTT TATTCG

    Gene models with high sequence identity

    1. AT1G78810.2 [+] show detail - unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria -...
      E-value: 1e-11; Score: 68.60

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    Coil coiled-coil 0

    See the detailed result >

    AT1G78810.2

    Model type
    Protein coding
    Computational Description
    unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR