K15522

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K15522

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • low brightness (PATO:0000327)
    (Seed::Color::dark)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K15522

Determination of introduced cDNA(s)

  • J023025I16 - Rice Full-length cDNAs - Original: J023025I16

    full reading [+] show sequence

    Nucleotide sequence: J023025I16 - full reading 
    GGCAAATGGG CGGCGGCGGC GGCGGGAGGC CGACGGCGAG CGGGGCGAAC 
    AGCAGCAGCA GCAGCGATGA TGACGGGGAC GCCGCCTGGA AGGCGGCCAT 
    CGAATCCATC GCCGCCGTGG GTTTCGGCCT GCCGCTGTCC AACGGCGCGG 
    CGAAGGCCAC CTCTGGCGGC GGCGGCGAGG CCAGCCACGG CGTGGAGCAG 
    CAGCCGCCGC AGGAGGGGAA GGCGCAAGCA CCTGGGCTTA AGCTTTACCA 
    GATCAAGGTA AGGAACATGT TGGACAACAT GTTAGAGAAA AACCTTGAAA 
    TAGTCAAAAC TACCTGTTCG AACTTGGCCG ATCCTATGGA AACAGATGGA 
    GGGATAAAAT TATTTAAAAA GGCTCCACCT GGCATCAGAA TGGATGCCAT 
    GGATAAATAC CATGTGCAAC TGAAGAGACC AAGAATTCTG CCTGGAACAG 
    ATATCGATGA GAAATCCAAG AAGTTCAGGC ATATGCTTAA GTCTGTTGCT 
    GTTGATGGCA ATGATATACT TGTTTCCGCA AAGAAATCAT CAGAAAGATC 
    ATTGGCTAGA TTGGAAGCAA GAGAAGCTGC AGCGAAGGCA GCAGCCAAGA 
    GGGAAGAAGA AAGGGTGCGG GAACTGAAGA AGACTAGGGG AGAGAAATGG 
    CTTCCTTCAA TTGCTAGACA AATGAAGGAA GAAAAAGCTT GGGAGCAACG 
    GAAGTGATGA TGCCACCATC ATATCAATAG GGGTACCTGT GCTAATCTCT 
    GATGCCATCA TCGGCACTTC GGCAGTGACC TTCTTCACTT TCTGTCTATG 
    ACAAGGGACA GTAGATAGAT CATAGATTAA TGGATGATTT TGCGTAGCTG 
    ATAATTCAGT TCTGGATGTC AGCATTGCTC TGATCCCTAT ATGGGCCTTC 
    TTTGTAGACA ATTTTGTATT GTAACATTCC AGGATCTTGT GTGATGAAAG 
    TAGCGTATGT ATGCATTATT TGGATATGAA TCTAAAAAGC TT

    Gene models with high sequence identity

    1. AT3G49890.1 [+] show detail - unknown protein; Has 27 Blast hits to 27 proteins in 13 species: Archae - 0; Bacteria - 0; Metazo...
      E-value: 1e-19; Score: 94.40

     

    InterPro Scan Digest

    See the detailed result >

    AT3G49890.1

    Model type
    Protein coding
    Computational Description
    unknown protein; Has 27 Blast hits to 27 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR