K15639

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K15639

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K15639

Determination of introduced cDNA(s)

  • J013152B13 - Rice Full-length cDNAs - Original: J013152B13

    full reading [+] show sequence

    Nucleotide sequence: J013152B13 - full reading 
    GGCTCAGCTC GGCGATGAGA TGATGCCACC ACCAGTTCAA ACCCTACGCC 
    TCCTCCTCCT CACCCCTTTC CCGCCACCTC CTCGCCTCCG CTTCCACCGC 
    CTTACGGCCA CAGGGAGGTC CGACAATGCC GCCGCGGCGT CCGGCACCAC 
    GGCGAGGGAG CGCCGCCTCG CCAAGGTGCG GGAGGAGCGC CGCCGCCGTC 
    AGCACGAGCT CGACAACACC TATCCCGGCT GGGCAAGGGT TCTGGAGAAT 
    GCCTGCAGGG ACGACGACGA ACTCCGCGCC ATTCTCGGTG ATAGCATCGG 
    GAACCCAGAG CTCATGAAGC AAAGGATCCA AGAAAGGGTA CGCAAGAAAG 
    GCAGGGCACA ATTCAACAAA TCCAAGACAG GGTCTATTGT TGCATTCAAA 
    GTCAGCTTTC GAGACTTCAA CCCACTAAAT TCATTCATTT GGTTTGAACT 
    CTTTGGAGAA CCAACGGATC GAGATGTTGA TCTGCTTGGC GGTGTGATTC 
    AGGCTTGGTA TGTCATGGGG AGATTAGGAG CTTACAACTC TTCAAATTTG 
    CAGCTGGCCA ATTCAATGCT GGACTATGAC CCTTCATATG ATTCTGATCA 
    AGCTTCTGGT GTGATGCCTT CATCTTTCCA TGATATCAGT GATGTCGAAT 
    TCCAAGACAA TTGGGGCAGA GTTTGGGTGG ATCTTGGAAC ATCGGATTAT 
    CTTGGATTGG ATGTATTACT CAACTGTCTT ACACAATTAA GCTCAGAGCA 
    CTTGGGCATC AAACAAGTGG TATTTGGTGG CAAAAAAATG GGCGACTGGG 
    AAGAGGGGAT GAAGAACTCT GATTACGGAT ACAGGCATTT CAAGATATAG 
    CTGTACCGAG GAGTGATATG CAATGGTCAT GTGAGGGAGG CCTTCATATG 
    TACTCCAGGC CTCTGGGGAT TCTCCGGCCT ATAGTGGCAA GACTTTTCAC 
    TTGAAGCAGA GAAATTTTTT GGACGACTGA CCAAGATTAG TGTGCCTAGA 
    TTGATCTTGT GCTCGTGTGT GTAAATAATT TTAATTTTCC TCTAGGTTGT 
    ATTAGAACTG AATCCAACAA TCCAGTAAAA TGTATTGTAG CAATTATATC

    Gene models with high sequence identity

    1. AT5G08400.2 [+] show detail - Protein of unknown function (DUF3531)
      E-value: 6e-96; Score: 347.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G08400.2

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF3531)
    Computational Description
    Protein of unknown function (DUF3531); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3531 (InterPro:IPR021920); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3531) (TAIR:AT4G29400.1); Has 314 Blast hits to 314 proteins in 83 species: Archae - 0; Bacteria - 120; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR