K15706

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K15706

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
rosette leaf (PO:0000014)
  • increased size (PATO:0000586)
    (Rosette leaf::Shape::large)
  • increased width (PATO:0000600)
    (Rosette leaf::Shape::wide)
  • dark green (PATO:0001249)
    (Rosette leaf::Color::dark)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)
root (PO:0009005)
  • present in greater numbers in organism (PATO:0000470)
    (Root::Number::many)
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Stem::Others)
T2  
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • dark green (PATO:0001249)
    (Rosette leaf::Color::dark)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)

Invisible phenotypes

Original: K15706

Determination of introduced cDNA(s)

  • J033129F19 - Rice Full-length cDNAs - Original: J033129F19

    full reading [+] show sequence

    Nucleotide sequence: J033129F19 - full reading 
    GGCACTCATC TCAAGCTTTT CTCTCTCTCT CTCTCTTTGC ACTACATTCT 
    TGAATTCACA ACCTACAAAC AATCCAAGAA GATGTCTTGC TGCGGAGGAA 
    GCTGCAACTG TGGCTCTAGC TGCAAGTGCG GCAGCGGCTG CGGAAACATG 
    TACCCTGACC TGGCAGAGAA GACCACAAAC ACTTCAGCAA CTATGGTCCT 
    CGGGGTCGCA CCTGCGAAGG AGCAATTTGA GGGGGTTGGC AAGGCAGCAG 
    AGTCTGGTGA GGCTGCCCAT GGCTGCAGCT GTGGCTCCAG CTGCAAATGC 
    AATCCCTGCA ACTGCTAAAG GAGATGGTGA TCTGCATCAG CATGCTGATG 
    ATATGTACAA GTAAATAAAG AAGCCATTTG ATGCAATGGC TCCTGTGTGT 
    GTGTGTGTGC GACAGTGTGA GTCAGCTTGT GTTCTTCATC CTGATGTACT 
    AATGTGGCCT GTGAATATTG TGAGGTGTCT CCTGCTTTAC TCTCTTGTCA 
    GAATGTAATT AGAGGCTATA TATCATGGCC TTGTGATTGG AGCACCTGAA 
    GTTTTTACAG ACAACATTAT GTTTGTGTAA TATAATATGG TTTACTTGTG 
    C

    Gene models with high sequence identity

    1. AT3G09390.1 [+] show detail - metallothionein 2A
      E-value: 3e-08; Score: 55.50

     

    InterPro Scan Digest

    See the detailed result >

    AT3G09390.1

    Model type
    Protein coding
    Short Description
    metallothionein 2A
    Curator Summary
    metallothionein, binds to and detoxifies excess copper and other metals, limiting oxidative damage
    Computational Description
    metallothionein 2A (MT2A); CONTAINS InterPro DOMAIN/s: Plant metallothionein, family 15 (InterPro:IPR000347); BEST Arabidopsis thaliana protein match is: metallothionein 2B (TAIR:AT5G02380.1); Has 597 Blast hits to 588 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 53; Fungi - 2; Plants - 530; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR