K15723

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K15723

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
rosette leaf (PO:0000014)
  • present in greater numbers in organism (PATO:0000470)
    (Rosette leaf::Number::many)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Stem::Others)

Invisible phenotypes

Original: K15723

Determination of introduced cDNA(s)

  • J023023P13 - Rice Full-length cDNAs - Original: J023023P13

    full reading [+] show sequence

    Nucleotide sequence: J023023P13 - full reading 
    GTGGCGGCGG CCATACCGCA ACAAGTTCTC CTCCGCCGTC GCTTCCACGG 
    CCTCCCCCCA TCCCAAACGC GGTCGATCGC CGGCGAATCC CCACCGGACG 
    CCGAGGCGAC TGCCCCGCCG CTCGCCACCC TCCATCCCCG GCGTCCCCGA 
    AGTAACCCAC CGCCTCCTTC TTCTTCCCTC CATCTCTCCT GCACCCGAGT 
    GAGGGCGACC GCGATCTCTC AGATCCACCG AATCCGGAGA CCCCGCTCGC 
    GATCGAGTCA AACGCCTCCG AACCCTTAAT CCTCGCCGCC GCCGCCGCCG 
    CCGACGACGA CGACGAGGAC CTCCCCACTA GGATGAGCGG GAGGAAGAAT 
    GCCGGCAAGG CCTCGCCGTT TCTGCTCCTC CTCATCTCGG TGGGCTGCTT 
    CTTCGCGACC TACAACTTCC TGACGATGGT GGGCCACGGC CGGAGCCGGG 
    ACGCCGGGCC GCGGAAGATT CTCGGCGGCG TCGGCGGCGT CGGCGGCGGC 
    GGCTCGGACC CGTCGAAGAG GTTCCACGTC GCGCTCACGG CGACGGACGC 
    GCTCTACAGC CAGTGGCAGT CGCGGGTGAT GTACTACTGG TACAGGGAGA 
    TGAGGGATCG GCCTGGCTCC GACATGGGCG GCTTCACGCG GATCCTGCAC 
    TCCGGGAAGC CCGACGGATT GATGGATGAG ATACCTACCT TGGTGGTTGA 
    TCCCCTCCCC GAAGGCGCGG ATCGAGGTTA CATTGTCCTA AACAGGCCTT 
    GGGCATTTGT TCAATGGCTG AAGAAATCAA ACATCAAAGA AGACTATGTA 
    CTTATGGCTG AGCCAGATCA CATCTTTGTG AGGCCATTGC CAAACTTAGC 
    TCATGGCGAC GAACCTGCTG CGTTTCCCTT CTTCTACATC AAACCAACTG 
    AAAATGAAAT AATACTGAGG AAGTTCTTTC CTGAAGAAAA TGGACCAGTC 
    TCAAAAATTG ATCCTATTGG TAATTCCCCA GTGATTATCA AGAAGGCCCA 
    GCTTGAGAAG ATTGCTCCAA CTTGGATGAA TATTTCGTTG AAAATGAAAG 
    AGGATGTGGA GACAGACAAA GCTTTTGGAT GGGTCTTGGA AATGTATGCA 
    TATGCTGTCG CTAGTGCATT GCATGGTGTG CACTACAGCC TTCGTAAGGA 
    TTTTATGATT CAGCCTCCTT GGGACGCGAA ATCGGACAAC ACATTCATCA 
    TCCATTACAC TTATGGGTGT GATTATACAT TAAAGGGTGA GCTAACTTAT 
    GGGAAAATAG GGGAATGGCG GTTTGACAAA AGATCTTATC TTCGTTCACC 
    ACCGCCAAGA AATCTTACAT TACCTCCTCC AGGAGTTCCC GAAAGTGTGG 
    CCACCCTTGT GAAAATGGTC AATGAAGCCA CTGCAAACAT TCCAGGGTGG 
    GACGAAGAAA GGTGATTAAA TGGTTTTGCC TCGCTGATAC TCAATTCAGC 
    TGATAGTGTT TACATTAGAA GCCATCGAAG GATCTCCGTG GTCAATAAAA 
    CAAGTGAATC AACGCATGTT CTTCTTAGGC GGCAGACACG ATTGGCTAAT 
    TCCTACAAAT TAACCTAGAA TTAGTTTTTG GCAAGTAAAA CACGGTAGTT 
    ATTTGGTCAA GTGAGGTGGT CCATTTTTGG TGTTGTAAAG CTGAAACGTG 
    AGCTTTTGGT AATACTCCTA GATCATTCGA TTGTATTGTA AAGCAGAAAT 
    ATTAGTCAAG TTTGTTGCAC GGGAATGTTA CTCGATAATT GAGGCTTGGG 
    ATCCTTCGCG CTTGTGCCAT TACATGAAAT CTTTCAAAAA GTAGTGTTTG 
    TCATGAGAGG ATTGAGAGAG ATGGTTTGAG AGGGAAGCAT GGAATTCACA 
    TGACGATCAG GTGTTCCTAG TTAAGTTGCA TACTTACAGT CC

    Gene models with high sequence identity

    1. AT5G13500.3 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 2e-136; Score: 483.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G13500.3

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR

  • J033097A01 - Rice Full-length cDNAs - Original: J033097A01

    full reading [+] show sequence

    Nucleotide sequence: J033097A01 - full reading 
    GTGAGAGAGA GAGAGAGAGA TAGGGGGTGC GGGAGGTAGA GTGAGAGAGA 
    GATTTAGAGG CGATTTCGCC GCGGTGAGGA GTGCGGCTCG CCGTGGCGGA 
    GATTTCGTCG TGCCGGTGCT GATCTGTGTC GTGTTTGAGT TTGTTTTTCG 
    CCGGTGAGGA GCTCCTGCTC AACGGATTTT TCCACTGTGT CGAGTTATTC 
    GTCGTTGAAG ATTCATTTGG CCAGTTTTTT TTTTGTTTTT TTTCATGTTC 
    ATCACTGCCT CCTCCTCTAT TTTTTCGCCA TGCCGGTGCC GATCTGTTCG 
    TTGACATCGT TTTTGTCGGT GAGGAGGGTA TGATGTACCA CGTTTTCCAC 
    TGTGTCGAGC TGGTCATAGA CGTAGGTTTT TTTTTTTGGC GATTTGTTCA 
    TGTCGTTCTC CATTTTTTCC TTCCAATAGA TCTAGCTTGG ACATGCACCA 
    TTTATGTTTG ATTTTTTTGA TTTTTTGTGA ATAGGTTGTG TTCTAGATTC 
    ATTTGTTTTT GTTTTTTTCA TGTTCCTCCC CACGTCCTTC TTCATTTATT 
    TCTTCGAATA GATCTAGCTA GGACTTGCAC AAATTATGTA ACCCCATCTC 
    ATTTGCTACT TCCCTAACCT ATTTGTTTTT TTAGATCTGC TTTGTTTCAT 
    GTTTTCAATG CTATTTTTAT TTTTTTTTCA TGTTGTTTAA TGTTCGATTT 
    GCAGCTGTTT TCTGGTTTTT TTTTTGTCTT ACTTTGTGTA TTTGTTATAT 
    GAGGCGCAGA TCTGCTTAAT TCATCGAAGA TGGGTAATGA TAAGGACATT 
    GAGGATATTT TGTCTGATTC TATTTCTTCT GAGTCTGATA GTTCTACAAA 
    TGATGAATGC TATTCTGATA GTGATCTATA TGCCTGTTTC TTAAGAAAAT 
    TCAAAACAAG TTAGTGTCTG ACATGACAAT CTACCTTATA TCAATCTCAT 
    TTGACAGAAA TGTAGATCAA TATTCAGAAG ATTTGAGTTA AGTTTTGTGA 
    TTTATTCTGA TGAAGATTCA TATCAAGAAG GTTCAAAGAA GATTCAGAAC 
    AAGAATCAGA AGACTAAACC AAAGAAGAAT GAATTTTAAT TTGGATGCAA 
    TTTGAAGATC AAGAAACAAA TGAACAAGTC ACTGGATTCA GAAGAAGAAG 
    ATTTGTTAAA TAGATTTGAT GCATCAACCA GATTCAGAAG ATTCTTTTTC 
    TTCTTGAATA GTGTTTTGGG TTATCTATCT TTGTTAGTGT TTTGGGTTTT 
    GTATATATTG TTAGTTAAGT TGCTGGGCTA AATTTGAGTC AGTTCTTTTG 
    TTTTGGGCCT TTAAATTGAC TACAGTGTTA ATTTGGGCTT TCATTTGATG 
    TAAATTTTGT ATTTGGGCTC AATCTGGACT ATTTGATTGG GTCGAGTTGT 
    ATTTGAGCCC TTCGAAAATG GGCTTCCAAA CCTATTTGTT ATTGTTTATC 
    TATGTATTTT TAATTTTTAT TTGTCAAATA ATAGTAGCTG TTGGATCT

    Gene models with high sequence identity

    Not founds.

     

    InterPro Scan Digest

    See the detailed result >