K15734

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K15734

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
cauline leaf (PO:0000013)
  • decreased width (PATO:0000599)
    (Cauline leaf::Shape::narrow)
rosette leaf (PO:0000014)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Stem::Others)
T2  
cauline leaf (PO:0000013)
  • decreased width (PATO:0000599)
    (Cauline leaf::Shape::narrow)
  • abnormal (PATO:0000460)
    (Cauline leaf::Others)
rosette leaf (PO:0000014)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)
fruit (PO:0009001)
  • increased length (PATO:0000573)
    (Silique::Shape::long)

Invisible phenotypes

Original: K15734

Determination of introduced cDNA(s)

  • J013116I24 - Rice Full-length cDNAs - Original: J013116I24

    full reading [+] show sequence

    Nucleotide sequence: J013116I24 - full reading 
    GGAGGTCCGT GGCGTTGGAG TGAGGACTGA GGAGGAAGAA GAGGGCGGGA 
    TCTAGGGTAC CGGATGCGCT GGCTGTGCTG AGTGAGAGTA GAGATGAGCG 
    CGTCTCGGTT CATCAAGTGC GTCACCGTGG GGGACGGCGC CGTGGGCAAG 
    ACCTGCATGC TCATCTCCTA CACCTCCAAC ACCTTCCCCA CGGACTATGT 
    TCCAACTGTT TTTGATAACT TCAGTGCAAA TGTTGTGGTC GATGGGAGCA 
    CTGTGAACTT GGGGTTGTGG GATACAGCAG AGGACTACAA TAGGCTACGC 
    CCGTTGAGCT ATCGTGGCGC TGATGTTTTC CTGCTGGCCT TTTCTCTGAT 
    CAGCAAAGCA AGCTATGAGA ATGTTTCTAA AAAGTGGATA CCTGAATTAA 
    GGCATTATGC TCCTGGTGTG CCAATAATTC TCGTTGGAAC AAAGCTTGAT 
    CTGCGGGATG ATAAGCAATT TTTCGTAGAT CACCCTGGTG CTGTACCTAT 
    TTCCACTGCT CAGGGCGAAG AGCTGAGGAA ACTCATTGGT GCAGCGGCAT 
    ACATTGAATG CAGTTCAAAA ACACAGCAAA ACATCAAGGC AGTTTTCGAT 
    GCTGCGATTA AGGTGGTTCT CCAGCCTCCA AAGCAAAAGA AGAAGAAGAA 
    AAAGGCGCAG AAAGGATGTG CCATCTTGTA ATTAAATGGT AGACAGTGCA 
    GTGCAGATCG ATGTATCCCT TCATTTGTAG CCTCTGGCTT CAATCGTCGC 
    TTGTTTGTAT AATTACGCTA GATGCCACCG GCAGAAGATA TAATATAGTC 
    CTCCTGCCTT TGTGGTGTTG GTCTCTAAGG TCGTCCAGAC TCCAGAGTCC 
    AGACGCATTT GGTTTCTTTT GTTCTATCTA TAATCAATCT ATCTATATCT 
    GCTAGTGTTG TGCTTCTGCT AGTTATGCGG ATGAGAAAGG GAATTTACCT 
    TCCCTGTTTC TGGGCTTCTG GCTTGCACGG GAAAGGTCGG TTTGTTTGCA 
    ATATACTACT ACCACTCCAG CTTGCTAGGT TGATTAAAAT AAGCTACCAG 
    TAAGAATCGA TATGACGTAT CAGCATTTTA TTAAATCAGT GATTAATTTT 
    ACC

    Gene models with high sequence identity

    1. AT4G35020.3 [+] show detail - RAC-like 3
      E-value: 1e-92; Score: 336.00

    AT4G35020.3

    Model type
    Protein coding
    Short Description
    RAC-like 3
    Curator Summary
    A member of ROP GTPase gene family; Encodes a Rho-like GTP binding protein.
    Computational Description
    RAC-like 3 (RAC3); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras small GTPase, Rab type (InterPro:IPR003579), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RAC-like GTP binding protein 5 (TAIR:AT1G75840.1).
    Link
    InterPro Scan - TAIR